Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SPCS3P61009 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.48□□□□□ -0.41
SPCS3P61009 AL592309.1-201ENST00000443127 649 ntBASIC12.48□□□□□ -0.41
SPCS3P61009 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.48□□□□□ -0.41
SPCS3P61009 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.48□□□□□ -0.41
SPCS3P61009 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SPCS3P61009 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
SPCS3P61009 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 SPDYE17-201ENST00000412399 783 ntBASIC12.47□□□□□ -0.41
SPCS3P61009 AL590627.1-203ENST00000421194 1026 ntBASIC12.47□□□□□ -0.41
SPCS3P61009 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.47□□□□□ -0.41
SPCS3P61009 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.47□□□□□ -0.41
SPCS3P61009 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.47□□□□□ -0.41
SPCS3P61009 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms