Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CLDN12P56749 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN12P56749 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN12P56749 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CLDN12P56749 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.29□□□□□ -0.28
CLDN12P56749 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN12P56749 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN12P56749 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN12P56749 RARRES2P9-201ENST00000565168 469 ntBASIC13.29□□□□□ -0.28
CLDN12P56749 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN12P56749 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN12P56749 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CLDN12P56749 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN12P56749 MBLAC2-202ENST00000514906 1936 ntBASIC13.29□□□□□ -0.28
CLDN12P56749 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN12P56749 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN12P56749 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CLDN12P56749 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN12P56749 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN12P56749 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN12P56749 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CLDN12P56749 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CLDN12P56749 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 RPL13AP23-201ENST00000480739 586 ntBASIC13.28□□□□□ -0.28
CLDN12P56749 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.28□□□□□ -0.28
CLDN12P56749 AC026120.1-201ENST00000611536 926 ntBASIC13.28□□□□□ -0.28
CLDN12P56749 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN12P56749 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN12P56749 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN12P56749 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN12P56749 AC007787.1-201ENST00000588095 1583 ntBASIC13.28□□□□□ -0.28
CLDN12P56749 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN12P56749 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN12P56749 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms