Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.2□□□□□ -0.3
SNU13P55769 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.2□□□□□ -0.3
SNU13P55769 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNU13P55769 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 RPL5P21-201ENST00000404620 815 ntBASIC13.2□□□□□ -0.3
SNU13P55769 AC074338.1-201ENST00000416825 156 ntBASIC13.2□□□□□ -0.3
SNU13P55769 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.2□□□□□ -0.3
SNU13P55769 CNN2P2-201ENST00000443536 909 ntBASIC13.2□□□□□ -0.3
SNU13P55769 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 CNN2P3-201ENST00000450201 906 ntBASIC13.2□□□□□ -0.3
SNU13P55769 RN7SL618P-201ENST00000477850 296 ntBASIC13.2□□□□□ -0.3
SNU13P55769 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.2□□□□□ -0.3
SNU13P55769 SLED1-202ENST00000512051 380 ntBASIC13.2□□□□□ -0.3
SNU13P55769 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
SNU13P55769 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.2□□□□□ -0.3
SNU13P55769 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.2□□□□□ -0.3
SNU13P55769 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 AL138828.2-201ENST00000615812 383 ntBASIC13.2□□□□□ -0.3
SNU13P55769 AL136317.3-201ENST00000618497 906 ntBASIC13.2□□□□□ -0.3
SNU13P55769 AC093028.1-201ENST00000622998 982 ntBASIC13.2□□□□□ -0.3
SNU13P55769 AC079781.4-201ENST00000641908 219 ntBASIC13.2□□□□□ -0.3
SNU13P55769 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNU13P55769 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.2□□□□□ -0.3
SNU13P55769 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SNU13P55769 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.2□□□□□ -0.3
SNU13P55769 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.2□□□□□ -0.3
SNU13P55769 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNU13P55769 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNU13P55769 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.19□□□□□ -0.3
SNU13P55769 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.19□□□□□ -0.3
SNU13P55769 AC117489.1-201ENST00000625169 3217 ntBASIC13.19□□□□□ -0.3
SNU13P55769 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNU13P55769 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SNU13P55769 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNU13P55769 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.19□□□□□ -0.3
SNU13P55769 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.19□□□□□ -0.3
SNU13P55769 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SNU13P55769 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNU13P55769 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.19□□□□□ -0.3
SNU13P55769 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.19□□□□□ -0.3
SNU13P55769 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.19□□□□□ -0.3
SNU13P55769 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.19□□□□□ -0.3
SNU13P55769 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.19□□□□□ -0.3
SNU13P55769 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.19□□□□□ -0.3
SNU13P55769 IGHV3-42-201ENST00000520410 361 ntBASIC13.19□□□□□ -0.3
SNU13P55769 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.19□□□□□ -0.3
SNU13P55769 AC027369.6-201ENST00000525520 931 ntBASIC13.19□□□□□ -0.3
SNU13P55769 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.19□□□□□ -0.3
SNU13P55769 AL512361.1-201ENST00000554200 418 ntBASIC13.19□□□□□ -0.3
SNU13P55769 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.19□□□□□ -0.3
SNU13P55769 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 LINC01115-203ENST00000606068 577 ntBASIC13.19□□□□□ -0.3
SNU13P55769 AL109936.8-201ENST00000641772 604 ntBASIC13.19□□□□□ -0.3
SNU13P55769 AL031595.1-201ENST00000623969 4709 ntBASIC13.19□□□□□ -0.3
SNU13P55769 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.19□□□□□ -0.3
SNU13P55769 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNU13P55769 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms