Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHB3P54753 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHB3P54753 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
EPHB3P54753 KRT8P29-201ENST00000420409 1371 ntBASIC15.78■□□□□ 0.12
EPHB3P54753 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHB3P54753 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
EPHB3P54753 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.78■□□□□ 0.12
EPHB3P54753 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
EPHB3P54753 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.78■□□□□ 0.12
EPHB3P54753 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.78■□□□□ 0.12
EPHB3P54753 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
EPHB3P54753 AC005077.2-201ENST00000449786 690 ntBASIC15.78■□□□□ 0.12
EPHB3P54753 IGHJ2P-201ENST00000454480 60 ntBASIC15.78■□□□□ 0.12
EPHB3P54753 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
EPHB3P54753 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
EPHB3P54753 AC138649.2-201ENST00000615886 705 ntBASIC15.78■□□□□ 0.12
EPHB3P54753 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
EPHB3P54753 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
EPHB3P54753 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHB3P54753 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHB3P54753 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHB3P54753 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHB3P54753 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
EPHB3P54753 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.77■□□□□ 0.12
EPHB3P54753 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
EPHB3P54753 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHB3P54753 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHB3P54753 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
EPHB3P54753 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHB3P54753 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHB3P54753 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.77■□□□□ 0.12
EPHB3P54753 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHB3P54753 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHB3P54753 AC044849.1-201ENST00000519737 1188 ntBASIC15.77■□□□□ 0.12
EPHB3P54753 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHB3P54753 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHB3P54753 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.77■□□□□ 0.12
EPHB3P54753 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHB3P54753 NDUFV2P1-201ENST00000596415 907 ntBASIC15.77■□□□□ 0.12
EPHB3P54753 AC084346.2-201ENST00000607097 949 ntBASIC15.77■□□□□ 0.12
EPHB3P54753 AC138696.2-201ENST00000607376 223 ntBASIC15.77■□□□□ 0.12
EPHB3P54753 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.77■□□□□ 0.11
EPHB3P54753 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHB3P54753 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
EPHB3P54753 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHB3P54753 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.77■□□□□ 0.11
EPHB3P54753 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHB3P54753 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
EPHB3P54753 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
EPHB3P54753 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.77■□□□□ 0.11
EPHB3P54753 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
EPHB3P54753 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHB3P54753 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHB3P54753 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHB3P54753 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
EPHB3P54753 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
EPHB3P54753 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHB3P54753 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHB3P54753 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
EPHB3P54753 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms