Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE1AP54750 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.51■□□□□ 0.55
PDE1AP54750 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.51■□□□□ 0.55
PDE1AP54750 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE1AP54750 AC004466.1-201ENST00000599515 1080 ntBASIC18.51■□□□□ 0.55
PDE1AP54750 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.51■□□□□ 0.55
PDE1AP54750 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PDE1AP54750 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PDE1AP54750 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PDE1AP54750 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE1AP54750 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.5■□□□□ 0.55
PDE1AP54750 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PDE1AP54750 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.5■□□□□ 0.55
PDE1AP54750 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.5■□□□□ 0.55
PDE1AP54750 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.5■□□□□ 0.55
PDE1AP54750 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.5■□□□□ 0.55
PDE1AP54750 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDE1AP54750 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PDE1AP54750 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PDE1AP54750 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.5■□□□□ 0.55
PDE1AP54750 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.5■□□□□ 0.55
PDE1AP54750 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.5■□□□□ 0.55
PDE1AP54750 AL603764.1-201ENST00000636452 321 ntBASIC18.5■□□□□ 0.55
PDE1AP54750 AC113367.3-201ENST00000508316 1912 ntBASIC18.5■□□□□ 0.55
PDE1AP54750 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
PDE1AP54750 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PDE1AP54750 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.5■□□□□ 0.55
PDE1AP54750 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PDE1AP54750 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDE1AP54750 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 KRT8P35-201ENST00000483942 1338 ntBASIC18.49■□□□□ 0.55
PDE1AP54750 NORAD-201ENST00000565493 5339 ntBASIC18.49■□□□□ 0.55
PDE1AP54750 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDE1AP54750 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 ACTG1P3-201ENST00000431775 1114 ntBASIC18.49■□□□□ 0.55
PDE1AP54750 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.49■□□□□ 0.55
PDE1AP54750 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.49■□□□□ 0.55
PDE1AP54750 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 AC009486.1-201ENST00000569860 813 ntBASIC18.49■□□□□ 0.55
PDE1AP54750 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.49■□□□□ 0.55
PDE1AP54750 AC025048.6-201ENST00000634326 1161 ntBASIC18.49■□□□□ 0.55
PDE1AP54750 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDE1AP54750 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE1AP54750 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PDE1AP54750 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDE1AP54750 AL009178.2-201ENST00000597278 2719 ntBASIC18.49■□□□□ 0.55
PDE1AP54750 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE1AP54750 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE1AP54750 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDE1AP54750 LRRC59-203ENST00000576448 1531 ntBASIC18.49■□□□□ 0.55
PDE1AP54750 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE1AP54750 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE1AP54750 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDE1AP54750 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.48■□□□□ 0.55
PDE1AP54750 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.48■□□□□ 0.55
PDE1AP54750 AC097359.2-201ENST00000604992 2389 ntBASIC18.48■□□□□ 0.55
PDE1AP54750 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms