Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CEP164P1-201ENST00000455142 418 ntBASIC16.72■□□□□ 0.27
CDK7P50613 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.72■□□□□ 0.27
CDK7P50613 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDK7P50613 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.72■□□□□ 0.27
CDK7P50613 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.72■□□□□ 0.27
CDK7P50613 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.72■□□□□ 0.27
CDK7P50613 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.72■□□□□ 0.27
CDK7P50613 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDK7P50613 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK7P50613 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDK7P50613 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK7P50613 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK7P50613 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK7P50613 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDK7P50613 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK7P50613 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CDK7P50613 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
CDK7P50613 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDK7P50613 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDK7P50613 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.71■□□□□ 0.27
CDK7P50613 GHSR-202ENST00000427970 912 ntBASIC16.71■□□□□ 0.27
CDK7P50613 PDIA3P2-201ENST00000428073 158 ntBASIC16.71■□□□□ 0.27
CDK7P50613 AL353637.1-201ENST00000451571 732 ntBASIC16.71■□□□□ 0.27
CDK7P50613 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.71■□□□□ 0.27
CDK7P50613 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.71■□□□□ 0.27
CDK7P50613 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK7P50613 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK7P50613 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
CDK7P50613 AL160314.3-201ENST00000556041 767 ntBASIC16.71■□□□□ 0.27
CDK7P50613 AC073352.2-201ENST00000609385 439 ntBASIC16.71■□□□□ 0.27
CDK7P50613 AL136301.1-201ENST00000615830 422 ntBASIC16.71■□□□□ 0.27
CDK7P50613 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.71■□□□□ 0.27
CDK7P50613 AL136295.7-201ENST00000619226 1200 ntBASIC16.71■□□□□ 0.27
CDK7P50613 AC006453.1-201ENST00000636037 1257 ntBASIC16.71■□□□□ 0.27
CDK7P50613 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.71■□□□□ 0.27
CDK7P50613 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.71■□□□□ 0.27
CDK7P50613 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK7P50613 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
CDK7P50613 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CDK7P50613 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.7■□□□□ 0.26
CDK7P50613 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK7P50613 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 TSPY26P-202ENST00000565928 3884 ntBASIC16.7■□□□□ 0.26
CDK7P50613 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK7P50613 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 RN7SKP214-201ENST00000364208 315 ntBASIC16.7■□□□□ 0.26
CDK7P50613 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.7■□□□□ 0.26
CDK7P50613 AC026316.1-201ENST00000398900 414 ntBASIC16.7■□□□□ 0.26
CDK7P50613 RN7SKP175-201ENST00000408472 289 ntBASIC16.7■□□□□ 0.26
CDK7P50613 AC026434.2-201ENST00000506094 1078 ntBASIC16.7■□□□□ 0.26
CDK7P50613 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK7P50613 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.7■□□□□ 0.26
CDK7P50613 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK7P50613 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDK7P50613 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK7P50613 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK7P50613 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK7P50613 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK7P50613 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDK7P50613 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
CDK7P50613 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK7P50613 AC024909.3-201ENST00000611513 2257 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms