Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AC004449.1-201ENST00000564240 433 ntBASIC9.74□□□□□ -0.85
UBE2AP49459 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC9.74□□□□□ -0.85
UBE2AP49459 AL136317.3-201ENST00000618497 906 ntBASIC9.74□□□□□ -0.85
UBE2AP49459 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC9.74□□□□□ -0.85
UBE2AP49459 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC9.74□□□□□ -0.85
UBE2AP49459 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC9.74□□□□□ -0.85
UBE2AP49459 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
UBE2AP49459 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC9.74□□□□□ -0.85
UBE2AP49459 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
UBE2AP49459 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC9.74□□□□□ -0.85
UBE2AP49459 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC9.74□□□□□ -0.85
UBE2AP49459 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC9.74□□□□□ -0.85
UBE2AP49459 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC9.74□□□□□ -0.85
UBE2AP49459 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
UBE2AP49459 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC9.74□□□□□ -0.85
UBE2AP49459 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2AP49459 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC9.73□□□□□ -0.85
UBE2AP49459 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
UBE2AP49459 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC9.73□□□□□ -0.85
UBE2AP49459 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC9.73□□□□□ -0.85
UBE2AP49459 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 AC148477.4-201ENST00000613430 1793 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC9.73□□□□□ -0.85
UBE2AP49459 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
UBE2AP49459 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC9.73□□□□□ -0.85
UBE2AP49459 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC9.73□□□□□ -0.85
UBE2AP49459 SPDYE14P-201ENST00000442619 822 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 EEF1DP4-201ENST00000446006 880 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 AC004967.1-201ENST00000453589 447 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC9.73□□□□□ -0.85
UBE2AP49459 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 HNRNPUP1-201ENST00000554987 333 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 COQ9-214ENST00000567933 882 ntTSL 3 BASIC9.73□□□□□ -0.85
UBE2AP49459 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 AP001059.3-201ENST00000619053 235 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
UBE2AP49459 LINC00628-201ENST00000628516 1289 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC9.73□□□□□ -0.85
UBE2AP49459 AC134684.3-201ENST00000641758 218 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
UBE2AP49459 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 GOLGA6L17P-202ENST00000614358 1398 ntBASIC9.73□□□□□ -0.85
UBE2AP49459 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
UBE2AP49459 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
UBE2AP49459 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBE2AP49459 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms