Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLCN1P35523 AC097376.2-205ENST00000610159 5334 ntBASIC17.38■□□□□ 0.37
CLCN1P35523 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCN1P35523 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCN1P35523 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.38■□□□□ 0.37
CLCN1P35523 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCN1P35523 GPX1P2-201ENST00000429271 606 ntBASIC17.38■□□□□ 0.37
CLCN1P35523 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 KRT8P48-201ENST00000515599 1220 ntBASIC17.38■□□□□ 0.37
CLCN1P35523 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
CLCN1P35523 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCN1P35523 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCN1P35523 AC027307.2-201ENST00000591252 911 ntBASIC17.38■□□□□ 0.37
CLCN1P35523 MIR4321-201ENST00000592276 80 ntBASIC17.38■□□□□ 0.37
CLCN1P35523 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 C20orf181-201ENST00000623918 480 ntBASIC17.38■□□□□ 0.37
CLCN1P35523 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN1P35523 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN1P35523 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CLCN1P35523 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.38■□□□□ 0.37
CLCN1P35523 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLCN1P35523 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN1P35523 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN1P35523 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLCN1P35523 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 AC073548.1-201ENST00000624088 1882 ntBASIC17.37■□□□□ 0.37
CLCN1P35523 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLCN1P35523 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN1P35523 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLCN1P35523 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 YBX2P1-201ENST00000394192 760 ntBASIC17.37■□□□□ 0.37
CLCN1P35523 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN1P35523 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.37■□□□□ 0.37
CLCN1P35523 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.37■□□□□ 0.37
CLCN1P35523 LINC01225-203ENST00000563550 1244 ntBASIC17.37■□□□□ 0.37
CLCN1P35523 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN1P35523 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN1P35523 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN1P35523 MTDHP5-201ENST00000598980 586 ntBASIC17.37■□□□□ 0.37
CLCN1P35523 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCN1P35523 AC008267.7-201ENST00000624570 1194 ntBASIC17.37■□□□□ 0.37
CLCN1P35523 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN1P35523 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN1P35523 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CLCN1P35523 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLCN1P35523 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms