Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 FRMPD2B-201ENST00000431305 1347 ntBASIC18.86■□□□□ 0.61
RFC4P35249 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC4P35249 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.86■□□□□ 0.61
RFC4P35249 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC4P35249 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.86■□□□□ 0.61
RFC4P35249 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC4P35249 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 MIR3677-201ENST00000578964 60 ntBASIC18.86■□□□□ 0.61
RFC4P35249 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.86■□□□□ 0.61
RFC4P35249 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC4P35249 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RFC4P35249 AC024909.3-201ENST00000611513 2257 ntBASIC18.86■□□□□ 0.61
RFC4P35249 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC4P35249 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.86■□□□□ 0.61
RFC4P35249 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.85■□□□□ 0.61
RFC4P35249 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.85■□□□□ 0.61
RFC4P35249 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.85■□□□□ 0.61
RFC4P35249 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.85■□□□□ 0.61
RFC4P35249 AL512430.1-201ENST00000392575 860 ntBASIC18.85■□□□□ 0.61
RFC4P35249 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
RFC4P35249 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.85■□□□□ 0.61
RFC4P35249 MIR4649-201ENST00000582839 64 ntBASIC18.85■□□□□ 0.61
RFC4P35249 MEG3_2.1-201ENST00000611456 105 ntBASIC18.85■□□□□ 0.61
RFC4P35249 LINC01783-202ENST00000614408 828 ntBASIC18.85■□□□□ 0.61
RFC4P35249 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 BX284668.2-205ENST00000619677 828 ntBASIC18.85■□□□□ 0.61
RFC4P35249 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFC4P35249 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RFC4P35249 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.85■□□□□ 0.61
RFC4P35249 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC4P35249 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RFC4P35249 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC4P35249 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
RFC4P35249 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFC4P35249 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFC4P35249 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RFC4P35249 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC4P35249 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.84■□□□□ 0.61
RFC4P35249 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.84■□□□□ 0.61
RFC4P35249 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC4P35249 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.84■□□□□ 0.61
RFC4P35249 AC007881.3-201ENST00000608897 607 ntBASIC18.84■□□□□ 0.61
RFC4P35249 AC027601.3-201ENST00000622907 509 ntBASIC18.84■□□□□ 0.61
RFC4P35249 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC4P35249 AC010491.1-201ENST00000563101 2797 ntBASIC18.84■□□□□ 0.61
RFC4P35249 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC4P35249 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFC4P35249 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC4P35249 AC012508.2-201ENST00000567613 1472 ntBASIC18.84■□□□□ 0.61
RFC4P35249 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC4P35249 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms