Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.56□□□□□ -0.24
HOXC12P31275 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HOXC12P31275 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.56□□□□□ -0.24
HOXC12P31275 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.56□□□□□ -0.24
HOXC12P31275 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 FO681548.1-201ENST00000455617 1132 ntBASIC13.56□□□□□ -0.24
HOXC12P31275 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HOXC12P31275 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.56□□□□□ -0.24
HOXC12P31275 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.56□□□□□ -0.24
HOXC12P31275 AC009486.1-201ENST00000569860 813 ntBASIC13.56□□□□□ -0.24
HOXC12P31275 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.56□□□□□ -0.24
HOXC12P31275 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.56□□□□□ -0.24
HOXC12P31275 AC025181.2-201ENST00000606994 802 ntBASIC13.56□□□□□ -0.24
HOXC12P31275 AL022328.1-201ENST00000610050 478 ntBASIC13.56□□□□□ -0.24
HOXC12P31275 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.56□□□□□ -0.24
HOXC12P31275 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.56□□□□□ -0.24
HOXC12P31275 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.56□□□□□ -0.24
HOXC12P31275 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.56□□□□□ -0.24
HOXC12P31275 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.55□□□□□ -0.24
HOXC12P31275 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HOXC12P31275 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.55□□□□□ -0.24
HOXC12P31275 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
HOXC12P31275 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HOXC12P31275 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.55□□□□□ -0.24
HOXC12P31275 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.55□□□□□ -0.24
HOXC12P31275 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 FAM21FP-201ENST00000426241 1131 ntBASIC13.55□□□□□ -0.24
HOXC12P31275 ACTG1P3-201ENST00000431775 1114 ntBASIC13.55□□□□□ -0.24
HOXC12P31275 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.55□□□□□ -0.24
HOXC12P31275 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.55□□□□□ -0.24
HOXC12P31275 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.55□□□□□ -0.24
HOXC12P31275 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.55□□□□□ -0.24
HOXC12P31275 PTP4A1P2-201ENST00000546033 454 ntBASIC13.55□□□□□ -0.24
HOXC12P31275 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.55□□□□□ -0.24
HOXC12P31275 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.55□□□□□ -0.24
HOXC12P31275 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.55□□□□□ -0.24
HOXC12P31275 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.55□□□□□ -0.24
HOXC12P31275 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HOXC12P31275 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HOXC12P31275 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.54□□□□□ -0.24
HOXC12P31275 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms