Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
HOXA6P31267 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 LINC01165-201ENST00000445190 1623 ntBASIC14.78□□□□□ -0.04
HOXA6P31267 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 CYP4F23P-201ENST00000593402 1579 ntBASIC14.78□□□□□ -0.04
HOXA6P31267 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 AC092850.2-201ENST00000623821 2697 ntBASIC14.78□□□□□ -0.04
HOXA6P31267 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 AC084018.2-201ENST00000613093 2607 ntBASIC14.78□□□□□ -0.04
HOXA6P31267 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 AC012362.1-201ENST00000434906 739 ntBASIC14.78□□□□□ -0.04
HOXA6P31267 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXA6P31267 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
HOXA6P31267 AP001184.1-201ENST00000637936 376 ntBASIC14.78□□□□□ -0.04
HOXA6P31267 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 ZBED1P1-201ENST00000502364 1930 ntBASIC14.78□□□□□ -0.04
HOXA6P31267 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXA6P31267 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HOXA6P31267 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXA6P31267 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.77□□□□□ -0.04
HOXA6P31267 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HOXA6P31267 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.77□□□□□ -0.04
HOXA6P31267 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.04
HOXA6P31267 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
HOXA6P31267 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXA6P31267 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.77□□□□□ -0.04
HOXA6P31267 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HOXA6P31267 MIR1227-201ENST00000408484 88 ntBASIC14.77□□□□□ -0.05
HOXA6P31267 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.77□□□□□ -0.05
HOXA6P31267 TSPY25P-201ENST00000429463 745 ntBASIC14.77□□□□□ -0.05
HOXA6P31267 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.77□□□□□ -0.05
HOXA6P31267 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXA6P31267 GCOM2-201ENST00000509133 1104 ntBASIC14.77□□□□□ -0.05
HOXA6P31267 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.77□□□□□ -0.05
HOXA6P31267 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXA6P31267 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.77□□□□□ -0.05
HOXA6P31267 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXA6P31267 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.77□□□□□ -0.05
HOXA6P31267 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.77□□□□□ -0.05
HOXA6P31267 AC105137.3-201ENST00000617588 984 ntBASIC14.77□□□□□ -0.05
HOXA6P31267 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.77□□□□□ -0.05
HOXA6P31267 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXA6P31267 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.77□□□□□ -0.05
HOXA6P31267 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HOXA6P31267 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXA6P31267 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 AL603832.2-201ENST00000566195 2125 ntBASIC14.77□□□□□ -0.05
HOXA6P31267 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXA6P31267 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXA6P31267 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms