Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL136982.4-201ENST00000437689 1740 ntBASIC13.24□□□□□ -0.29
HLA-DMAP28067 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DMAP28067 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DMAP28067 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DMAP28067 AC131902.2-201ENST00000566892 2172 ntBASIC13.24□□□□□ -0.29
HLA-DMAP28067 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HLA-DMAP28067 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DMAP28067 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CRYGEP-201ENST00000412192 528 ntBASIC13.23□□□□□ -0.29
HLA-DMAP28067 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 FAM197Y8-203ENST00000450145 560 ntBASIC13.23□□□□□ -0.29
HLA-DMAP28067 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC092910.1-201ENST00000482027 1129 ntBASIC13.23□□□□□ -0.29
HLA-DMAP28067 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC138969.3-201ENST00000546612 1459 ntBASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC138932.2-201ENST00000548268 1459 ntBASIC13.23□□□□□ -0.29
HLA-DMAP28067 AC126755.4-201ENST00000549796 1459 ntBASIC13.23□□□□□ -0.29
HLA-DMAP28067 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HLA-DMAP28067 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 KRT8P22-201ENST00000562317 1415 ntBASIC13.22□□□□□ -0.29
HLA-DMAP28067 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 CICP16-201ENST00000502609 2813 ntBASIC13.22□□□□□ -0.29
HLA-DMAP28067 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 AC018712.1-201ENST00000455767 687 ntBASIC13.22□□□□□ -0.29
HLA-DMAP28067 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.22□□□□□ -0.29
HLA-DMAP28067 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 AC096734.2-201ENST00000562054 433 ntBASIC13.22□□□□□ -0.29
HLA-DMAP28067 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 AC023141.13-201ENST00000604991 943 ntBASIC13.22□□□□□ -0.29
HLA-DMAP28067 SPTSSB-204ENST00000617024 1292 ntBASIC13.22□□□□□ -0.29
HLA-DMAP28067 AC007064.4-201ENST00000637740 555 ntBASIC13.22□□□□□ -0.29
HLA-DMAP28067 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DMAP28067 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DMAP28067 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms