Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.42■□□□□ 0.06
CCND1P24385 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.42■□□□□ 0.06
CCND1P24385 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCND1P24385 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCND1P24385 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCND1P24385 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCND1P24385 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.41■□□□□ 0.06
CCND1P24385 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CCND1P24385 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CCND1P24385 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCND1P24385 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.41■□□□□ 0.06
CCND1P24385 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCND1P24385 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CCND1P24385 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CCND1P24385 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CCND1P24385 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.41■□□□□ 0.06
CCND1P24385 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CCND1P24385 FAM8A3P-201ENST00000427218 844 ntBASIC15.41■□□□□ 0.06
CCND1P24385 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.41■□□□□ 0.06
CCND1P24385 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.41■□□□□ 0.06
CCND1P24385 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.41■□□□□ 0.06
CCND1P24385 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.41■□□□□ 0.06
CCND1P24385 AC093028.1-201ENST00000622998 982 ntBASIC15.41■□□□□ 0.06
CCND1P24385 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.41■□□□□ 0.06
CCND1P24385 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 AC089987.1-201ENST00000551654 2209 ntBASIC15.41■□□□□ 0.06
CCND1P24385 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.41■□□□□ 0.06
CCND1P24385 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.41■□□□□ 0.06
CCND1P24385 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CCND1P24385 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCND1P24385 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CCND1P24385 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.4■□□□□ 0.06
CCND1P24385 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.4■□□□□ 0.06
CCND1P24385 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CCND1P24385 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCND1P24385 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.4■□□□□ 0.06
CCND1P24385 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 AL080243.2-201ENST00000418783 582 ntBASIC15.4■□□□□ 0.06
CCND1P24385 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.4■□□□□ 0.06
CCND1P24385 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.4■□□□□ 0.06
CCND1P24385 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.4■□□□□ 0.06
CCND1P24385 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.4■□□□□ 0.06
CCND1P24385 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.4■□□□□ 0.06
CCND1P24385 AL158211.3-201ENST00000607385 239 ntBASIC15.4■□□□□ 0.06
CCND1P24385 AC073592.8-201ENST00000624126 511 ntBASIC15.4■□□□□ 0.06
CCND1P24385 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.4■□□□□ 0.06
CCND1P24385 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCND1P24385 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 INTS4P1-203ENST00000641008 3683 ntBASIC15.4■□□□□ 0.06
CCND1P24385 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CCND1P24385 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCND1P24385 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms