Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFX1P22670 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX1P22670 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.59■□□□□ 0.25
RFX1P22670 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 AC092933.1-201ENST00000393644 945 ntBASIC16.59■□□□□ 0.25
RFX1P22670 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.59■□□□□ 0.25
RFX1P22670 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.59■□□□□ 0.25
RFX1P22670 FAM21FP-201ENST00000426241 1131 ntBASIC16.59■□□□□ 0.25
RFX1P22670 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RFX1P22670 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.59■□□□□ 0.25
RFX1P22670 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX1P22670 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX1P22670 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.59■□□□□ 0.25
RFX1P22670 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX1P22670 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX1P22670 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.59■□□□□ 0.25
RFX1P22670 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX1P22670 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RFX1P22670 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX1P22670 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFX1P22670 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX1P22670 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RFX1P22670 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX1P22670 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX1P22670 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX1P22670 AL390755.1-201ENST00000623716 2027 ntBASIC16.58■□□□□ 0.25
RFX1P22670 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFX1P22670 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.58■□□□□ 0.25
RFX1P22670 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.58■□□□□ 0.25
RFX1P22670 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFX1P22670 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.58■□□□□ 0.24
RFX1P22670 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RFX1P22670 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RFX1P22670 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.58■□□□□ 0.24
RFX1P22670 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RFX1P22670 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX1P22670 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.58■□□□□ 0.24
RFX1P22670 GAPDHP40-201ENST00000505218 1006 ntBASIC16.58■□□□□ 0.24
RFX1P22670 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX1P22670 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.58■□□□□ 0.24
RFX1P22670 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX1P22670 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.58■□□□□ 0.24
RFX1P22670 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.58■□□□□ 0.24
RFX1P22670 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX1P22670 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.58■□□□□ 0.24
RFX1P22670 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX1P22670 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 AL513477.1-201ENST00000602865 2407 ntBASIC16.58■□□□□ 0.24
RFX1P22670 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RFX1P22670 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX1P22670 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
RFX1P22670 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFX1P22670 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.57■□□□□ 0.24
RFX1P22670 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.57■□□□□ 0.24
RFX1P22670 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RFX1P22670 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.57■□□□□ 0.24
RFX1P22670 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms