Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH3P22223 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH3P22223 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15□□□□□ -0.01
CDH3P22223 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 AC007191.1-201ENST00000623179 2995 ntBASIC15□□□□□ -0.01
CDH3P22223 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15□□□□□ -0.01
CDH3P22223 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15□□□□□ -0.01
CDH3P22223 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CDH3P22223 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15□□□□□ -0.01
CDH3P22223 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDH3P22223 C1QBPP1-201ENST00000400117 770 ntBASIC15□□□□□ -0.01
CDH3P22223 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15□□□□□ -0.01
CDH3P22223 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15□□□□□ -0.01
CDH3P22223 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15□□□□□ -0.01
CDH3P22223 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15□□□□□ -0.01
CDH3P22223 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CDH3P22223 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15□□□□□ -0.01
CDH3P22223 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15□□□□□ -0.01
CDH3P22223 AC120045.2-201ENST00000567334 178 ntBASIC15□□□□□ -0.01
CDH3P22223 AC010319.3-201ENST00000597028 470 ntBASIC15□□□□□ -0.01
CDH3P22223 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15□□□□□ -0.01
CDH3P22223 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15□□□□□ -0.01
CDH3P22223 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 OR2I1P-209ENST00000641730 5365 ntBASIC15□□□□□ -0.01
CDH3P22223 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15□□□□□ -0.01
CDH3P22223 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CDH3P22223 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CDH3P22223 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15□□□□□ -0.01
CDH3P22223 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH3P22223 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH3P22223 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH3P22223 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH3P22223 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH3P22223 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms