Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
RAB3BP20337 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
RAB3BP20337 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RAB3BP20337 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.39□□□□□ -0.27
RAB3BP20337 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB3BP20337 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RAB3BP20337 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB3BP20337 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RAB3BP20337 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 TFAMP1-201ENST00000412727 736 ntBASIC13.39□□□□□ -0.27
RAB3BP20337 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RAB3BP20337 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.39□□□□□ -0.27
RAB3BP20337 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.39□□□□□ -0.27
RAB3BP20337 IGHV3-22-201ENST00000520721 359 ntBASIC13.39□□□□□ -0.27
RAB3BP20337 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
RAB3BP20337 PDPK2P-202ENST00000562415 1191 ntBASIC13.39□□□□□ -0.27
RAB3BP20337 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.39□□□□□ -0.27
RAB3BP20337 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.39□□□□□ -0.27
RAB3BP20337 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB3BP20337 AL645728.2-202ENST00000641679 227 ntBASIC13.39□□□□□ -0.27
RAB3BP20337 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB3BP20337 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RAB3BP20337 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB3BP20337 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB3BP20337 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB3BP20337 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 COL6A4P2-202ENST00000504443 2753 ntBASIC13.38□□□□□ -0.27
RAB3BP20337 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.38□□□□□ -0.27
RAB3BP20337 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.38□□□□□ -0.27
RAB3BP20337 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB3BP20337 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.38□□□□□ -0.27
RAB3BP20337 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RAB3BP20337 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.38□□□□□ -0.27
RAB3BP20337 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RAB3BP20337 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB3BP20337 AC015910.1-201ENST00000579400 975 ntBASIC13.38□□□□□ -0.27
RAB3BP20337 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 AL445228.2-201ENST00000605589 952 ntBASIC13.38□□□□□ -0.27
RAB3BP20337 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.38□□□□□ -0.27
RAB3BP20337 AC064836.3-201ENST00000607928 673 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms