Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.81□□□□□ -0.36
CXCL3P19876 AC007787.1-201ENST00000588095 1583 ntBASIC12.81□□□□□ -0.36
CXCL3P19876 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CXCL3P19876 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CXCL3P19876 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCL3P19876 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CXCL3P19876 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCL3P19876 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CXCL3P19876 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.8□□□□□ -0.36
CXCL3P19876 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CXCL3P19876 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCL3P19876 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 DUSP5P1-201ENST00000441325 1139 ntBASIC12.8□□□□□ -0.36
CXCL3P19876 KRT18P31-201ENST00000506277 1292 ntBASIC12.8□□□□□ -0.36
CXCL3P19876 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.8□□□□□ -0.36
CXCL3P19876 HNRNPUP1-201ENST00000554987 333 ntBASIC12.8□□□□□ -0.36
CXCL3P19876 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCL3P19876 AC138894.3-201ENST00000603787 634 ntBASIC12.8□□□□□ -0.36
CXCL3P19876 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.8□□□□□ -0.36
CXCL3P19876 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCL3P19876 AP002761.4-201ENST00000565433 3361 ntBASIC12.8□□□□□ -0.36
CXCL3P19876 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CXCL3P19876 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.8□□□□□ -0.36
CXCL3P19876 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCL3P19876 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
CXCL3P19876 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
CXCL3P19876 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.8□□□□□ -0.36
CXCL3P19876 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CXCL3P19876 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CXCL3P19876 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CXCL3P19876 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CXCL3P19876 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
CXCL3P19876 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CXCL3P19876 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.79□□□□□ -0.36
CXCL3P19876 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CXCL3P19876 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCL3P19876 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CXCL3P19876 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCL3P19876 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CXCL3P19876 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCL3P19876 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 AC132008.2-207ENST00000454517 770 ntBASIC12.79□□□□□ -0.36
CXCL3P19876 RPS15P9-201ENST00000494093 319 ntBASIC12.79□□□□□ -0.36
CXCL3P19876 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.79□□□□□ -0.36
CXCL3P19876 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.79□□□□□ -0.36
CXCL3P19876 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CXCL3P19876 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.79□□□□□ -0.36
CXCL3P19876 AL078644.1-201ENST00000609881 752 ntBASIC12.79□□□□□ -0.36
CXCL3P19876 ACTL9-202ENST00000612068 1252 ntBASIC12.79□□□□□ -0.36
CXCL3P19876 SPTSSB-204ENST00000617024 1292 ntBASIC12.79□□□□□ -0.36
CXCL3P19876 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CXCL3P19876 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CXCL3P19876 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL3P19876 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CXCL3P19876 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 1726.3 ms