Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
ATF1P18846 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.41□□□□□ -0.26
ATF1P18846 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.41□□□□□ -0.26
ATF1P18846 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.41□□□□□ -0.26
ATF1P18846 MIR6069-201ENST00000620069 79 ntBASIC13.41□□□□□ -0.26
ATF1P18846 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ATF1P18846 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.41□□□□□ -0.26
ATF1P18846 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 CICP17-201ENST00000418553 2377 ntBASIC13.4□□□□□ -0.26
ATF1P18846 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ATF1P18846 AC089987.1-201ENST00000551654 2209 ntBASIC13.4□□□□□ -0.26
ATF1P18846 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.4□□□□□ -0.26
ATF1P18846 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ATF1P18846 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.4□□□□□ -0.26
ATF1P18846 MST1P2-201ENST00000457982 2291 ntBASIC13.4□□□□□ -0.26
ATF1P18846 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ATF1P18846 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 SPDYE7P-202ENST00000420373 878 ntBASIC13.4□□□□□ -0.26
ATF1P18846 AC023141.5-201ENST00000458585 616 ntBASIC13.4□□□□□ -0.26
ATF1P18846 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.4□□□□□ -0.26
ATF1P18846 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 AC112482.1-201ENST00000492080 688 ntBASIC13.4□□□□□ -0.26
ATF1P18846 SLED1-202ENST00000512051 380 ntBASIC13.4□□□□□ -0.26
ATF1P18846 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 AL589739.1-201ENST00000607720 493 ntBASIC13.4□□□□□ -0.26
ATF1P18846 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.4□□□□□ -0.26
ATF1P18846 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms