Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.15■□□□□ 0.02
NELFEP18615 AC092552.1-201ENST00000547243 906 ntBASIC15.15■□□□□ 0.02
NELFEP18615 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.15■□□□□ 0.02
NELFEP18615 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
NELFEP18615 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NELFEP18615 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NELFEP18615 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NELFEP18615 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NELFEP18615 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.15■□□□□ 0.02
NELFEP18615 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NELFEP18615 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NELFEP18615 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NELFEP18615 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NELFEP18615 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NELFEP18615 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NELFEP18615 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.15■□□□□ 0.02
NELFEP18615 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NELFEP18615 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.14■□□□□ 0.01
NELFEP18615 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NELFEP18615 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
NELFEP18615 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 AC107918.4-201ENST00000641966 3141 ntBASIC15.14■□□□□ 0.01
NELFEP18615 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.14■□□□□ 0.01
NELFEP18615 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 RN7SL837P-201ENST00000463010 287 ntBASIC15.14■□□□□ 0.01
NELFEP18615 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.14■□□□□ 0.01
NELFEP18615 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.14■□□□□ 0.01
NELFEP18615 HNRNPUP1-201ENST00000554987 333 ntBASIC15.14■□□□□ 0.01
NELFEP18615 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.14■□□□□ 0.01
NELFEP18615 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.14■□□□□ 0.01
NELFEP18615 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NELFEP18615 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.14■□□□□ 0.01
NELFEP18615 WFDC1-204ENST00000613603 549 ntBASIC15.14■□□□□ 0.01
NELFEP18615 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.14■□□□□ 0.01
NELFEP18615 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.14■□□□□ 0.01
NELFEP18615 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
NELFEP18615 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NELFEP18615 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.14■□□□□ 0.01
NELFEP18615 LINC01101-201ENST00000622953 1884 ntBASIC15.14■□□□□ 0.01
NELFEP18615 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 AC041040.2-201ENST00000622926 2899 ntBASIC15.14■□□□□ 0.01
NELFEP18615 LINC01230-201ENST00000625222 3017 ntBASIC15.14■□□□□ 0.01
NELFEP18615 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NELFEP18615 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.13■□□□□ 0.01
NELFEP18615 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NELFEP18615 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.13■□□□□ 0.01
NELFEP18615 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.13■□□□□ 0.01
NELFEP18615 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.13■□□□□ 0.01
NELFEP18615 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.13■□□□□ 0.01
NELFEP18615 SLED1-202ENST00000512051 380 ntBASIC15.13■□□□□ 0.01
NELFEP18615 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.13■□□□□ 0.01
NELFEP18615 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NELFEP18615 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.13■□□□□ 0.01
NELFEP18615 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.13■□□□□ 0.01
NELFEP18615 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.13■□□□□ 0.01
NELFEP18615 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.13■□□□□ 0.01
NELFEP18615 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.13■□□□□ 0.01
NELFEP18615 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NELFEP18615 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NELFEP18615 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.13■□□□□ 0.01
NELFEP18615 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms