Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN1P18031 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 BNIP3P42-201ENST00000454982 569 ntBASIC16.08■□□□□ 0.16
PTPN1P18031 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
PTPN1P18031 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.08■□□□□ 0.16
PTPN1P18031 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.08■□□□□ 0.16
PTPN1P18031 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 BNIP3P29-201ENST00000598302 571 ntBASIC16.08■□□□□ 0.16
PTPN1P18031 AC011447.5-201ENST00000616168 564 ntBASIC16.08■□□□□ 0.16
PTPN1P18031 AC006453.4-201ENST00000636949 1252 ntBASIC16.08■□□□□ 0.16
PTPN1P18031 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN1P18031 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PTPN1P18031 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
PTPN1P18031 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.08■□□□□ 0.16
PTPN1P18031 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN1P18031 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.08■□□□□ 0.16
PTPN1P18031 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN1P18031 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN1P18031 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTPN1P18031 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PTPN1P18031 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PTPN1P18031 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 POM121L8P-201ENST00000417732 1281 ntBASIC16.07■□□□□ 0.16
PTPN1P18031 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.07■□□□□ 0.16
PTPN1P18031 RPS2P32-201ENST00000439199 892 ntBASIC16.07■□□□□ 0.16
PTPN1P18031 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 POM121L9P-203ENST00000441984 1285 ntBASIC16.07■□□□□ 0.16
PTPN1P18031 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.07■□□□□ 0.16
PTPN1P18031 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN1P18031 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTPN1P18031 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PTPN1P18031 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN1P18031 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN1P18031 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN1P18031 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN1P18031 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN1P18031 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN1P18031 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.06■□□□□ 0.16
PTPN1P18031 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PTPN1P18031 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN1P18031 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN1P18031 AHCYP2-201ENST00000430630 1300 ntBASIC16.06■□□□□ 0.16
PTPN1P18031 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN1P18031 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTPN1P18031 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.06■□□□□ 0.16
PTPN1P18031 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN1P18031 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN1P18031 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms