Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.3■□□□□ 0.2
SYN1P17600 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.3■□□□□ 0.2
SYN1P17600 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.3■□□□□ 0.2
SYN1P17600 ORAOV1P1-201ENST00000503108 395 ntBASIC16.3■□□□□ 0.2
SYN1P17600 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.3■□□□□ 0.2
SYN1P17600 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.3■□□□□ 0.2
SYN1P17600 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.3■□□□□ 0.2
SYN1P17600 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.3■□□□□ 0.2
SYN1P17600 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SYN1P17600 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
SYN1P17600 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.3■□□□□ 0.2
SYN1P17600 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SYN1P17600 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SYN1P17600 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYN1P17600 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
SYN1P17600 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SYN1P17600 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYN1P17600 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SYN1P17600 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 COX20P1-201ENST00000366529 357 ntBASIC16.29■□□□□ 0.2
SYN1P17600 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.29■□□□□ 0.2
SYN1P17600 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.29■□□□□ 0.2
SYN1P17600 FTH1P22-201ENST00000456305 520 ntBASIC16.29■□□□□ 0.2
SYN1P17600 FAM86B3P-203ENST00000523992 854 ntBASIC16.29■□□□□ 0.2
SYN1P17600 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SYN1P17600 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.29■□□□□ 0.2
SYN1P17600 AL451007.2-201ENST00000632004 563 ntBASIC16.29■□□□□ 0.2
SYN1P17600 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SYN1P17600 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 AC006449.5-201ENST00000610658 2098 ntBASIC16.29■□□□□ 0.2
SYN1P17600 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
SYN1P17600 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYN1P17600 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.29■□□□□ 0.2
SYN1P17600 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
SYN1P17600 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.29■□□□□ 0.2
SYN1P17600 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYN1P17600 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SYN1P17600 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SYN1P17600 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.28■□□□□ 0.2
SYN1P17600 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SYN1P17600 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
SYN1P17600 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.28■□□□□ 0.2
SYN1P17600 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SYN1P17600 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.28■□□□□ 0.2
SYN1P17600 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 GCSHP3-201ENST00000431120 391 ntBASIC16.28■□□□□ 0.2
SYN1P17600 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.28■□□□□ 0.2
SYN1P17600 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SYN1P17600 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.28■□□□□ 0.2
SYN1P17600 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.28■□□□□ 0.2
SYN1P17600 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.28■□□□□ 0.2
SYN1P17600 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.28■□□□□ 0.2
SYN1P17600 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.28■□□□□ 0.2
SYN1P17600 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYN1P17600 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYN1P17600 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYN1P17600 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.28■□□□□ 0.2
SYN1P17600 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SYN1P17600 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms