Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.86■□□□□ 0.13
TCF4P15884 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.86■□□□□ 0.13
TCF4P15884 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.86■□□□□ 0.13
TCF4P15884 AL355385.1-201ENST00000606123 409 ntBASIC15.86■□□□□ 0.13
TCF4P15884 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.86■□□□□ 0.13
TCF4P15884 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TCF4P15884 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.86■□□□□ 0.13
TCF4P15884 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCF4P15884 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TCF4P15884 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TCF4P15884 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TCF4P15884 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TCF4P15884 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TCF4P15884 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TCF4P15884 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.85■□□□□ 0.13
TCF4P15884 MYCLP2-201ENST00000449268 967 ntBASIC15.85■□□□□ 0.13
TCF4P15884 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.85■□□□□ 0.13
TCF4P15884 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TCF4P15884 AC093813.1-201ENST00000605066 256 ntBASIC15.85■□□□□ 0.13
TCF4P15884 AC008494.3-201ENST00000606615 944 ntBASIC15.85■□□□□ 0.13
TCF4P15884 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.85■□□□□ 0.13
TCF4P15884 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
TCF4P15884 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TCF4P15884 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TCF4P15884 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCF4P15884 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TCF4P15884 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.84■□□□□ 0.13
TCF4P15884 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.84■□□□□ 0.13
TCF4P15884 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.84■□□□□ 0.13
TCF4P15884 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.84■□□□□ 0.13
TCF4P15884 AL442647.2-201ENST00000429864 857 ntBASIC15.84■□□□□ 0.13
TCF4P15884 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.84■□□□□ 0.13
TCF4P15884 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.84■□□□□ 0.13
TCF4P15884 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.84■□□□□ 0.13
TCF4P15884 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 AC004233.3-201ENST00000607794 1269 ntBASIC15.84■□□□□ 0.13
TCF4P15884 AC005252.2-201ENST00000624630 1141 ntBASIC15.84■□□□□ 0.13
TCF4P15884 PRSS30P-206ENST00000641773 873 ntBASIC15.84■□□□□ 0.13
TCF4P15884 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TCF4P15884 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCF4P15884 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.83■□□□□ 0.13
TCF4P15884 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.83■□□□□ 0.13
TCF4P15884 AC005089.1-201ENST00000619486 2241 ntBASIC15.83■□□□□ 0.13
TCF4P15884 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TCF4P15884 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCF4P15884 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCF4P15884 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms