Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSBP07858 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSBP07858 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 WASH3P-207ENST00000560956 1394 ntBASIC14.34□□□□□ -0.11
CTSBP07858 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.33□□□□□ -0.11
CTSBP07858 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSBP07858 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.33□□□□□ -0.11
CTSBP07858 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSBP07858 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSBP07858 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSBP07858 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSBP07858 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CTSBP07858 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.33□□□□□ -0.11
CTSBP07858 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSBP07858 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 RN7SKP230-201ENST00000365642 335 ntBASIC14.33□□□□□ -0.12
CTSBP07858 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 RPSAP36-202ENST00000494591 1261 ntBASIC14.33□□□□□ -0.12
CTSBP07858 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 ZNF767P-206ENST00000513792 565 ntBASIC14.33□□□□□ -0.12
CTSBP07858 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.33□□□□□ -0.12
CTSBP07858 RN7SL713P-201ENST00000582127 302 ntBASIC14.33□□□□□ -0.12
CTSBP07858 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.33□□□□□ -0.12
CTSBP07858 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.33□□□□□ -0.12
CTSBP07858 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.33□□□□□ -0.12
CTSBP07858 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 MIR6869-201ENST00000619434 62 ntBASIC14.33□□□□□ -0.12
CTSBP07858 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.33□□□□□ -0.12
CTSBP07858 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 FKBP4P6-201ENST00000457486 1332 ntBASIC14.33□□□□□ -0.12
CTSBP07858 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSBP07858 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CTSBP07858 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.33□□□□□ -0.12
CTSBP07858 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSBP07858 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSBP07858 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CTSBP07858 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSBP07858 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSBP07858 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSBP07858 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSBP07858 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CTSBP07858 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSBP07858 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSBP07858 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSBP07858 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CTSBP07858 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.32□□□□□ -0.12
CTSBP07858 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.32□□□□□ -0.12
CTSBP07858 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.32□□□□□ -0.12
CTSBP07858 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSBP07858 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CTSBP07858 FTLP10-202ENST00000505798 471 ntBASIC14.32□□□□□ -0.12
CTSBP07858 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSBP07858 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
CTSBP07858 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.32□□□□□ -0.12
CTSBP07858 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms