Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04436 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04436 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
P04436 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.89□□□□□ -0.19
P04436 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P04436 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P04436 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04436 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
P04436 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04436 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P04436 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04436 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.88□□□□□ -0.19
P04436 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.88□□□□□ -0.19
P04436 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.88□□□□□ -0.19
P04436 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.88□□□□□ -0.19
P04436 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
P04436 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 MIR1202-201ENST00000408529 83 ntBASIC13.88□□□□□ -0.19
P04436 HLA-K-203ENST00000430151 1046 ntBASIC13.88□□□□□ -0.19
P04436 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.88□□□□□ -0.19
P04436 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.88□□□□□ -0.19
P04436 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.88□□□□□ -0.19
P04436 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.88□□□□□ -0.19
P04436 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.88□□□□□ -0.19
P04436 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.88□□□□□ -0.19
P04436 AC023024.2-201ENST00000623561 1993 ntBASIC13.88□□□□□ -0.19
P04436 AC112693.3-201ENST00000624819 1983 ntBASIC13.88□□□□□ -0.19
P04436 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.88□□□□□ -0.19
P04436 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.88□□□□□ -0.19
P04436 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.88□□□□□ -0.19
P04436 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.88□□□□□ -0.19
P04436 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.88□□□□□ -0.19
P04436 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
P04436 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
P04436 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.88□□□□□ -0.19
P04436 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04436 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
P04436 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.87□□□□□ -0.19
P04436 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P04436 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.87□□□□□ -0.19
P04436 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
P04436 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
P04436 AL157414.3-201ENST00000624276 1954 ntBASIC13.87□□□□□ -0.19
P04436 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
P04436 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.87□□□□□ -0.19
P04436 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 KRT8P44-201ENST00000441609 1350 ntBASIC13.87□□□□□ -0.19
P04436 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
P04436 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.87□□□□□ -0.19
P04436 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.87□□□□□ -0.19
P04436 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.87□□□□□ -0.19
P04436 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.87□□□□□ -0.19
P04436 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.87□□□□□ -0.19
P04436 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.87□□□□□ -0.19
P04436 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.87□□□□□ -0.19
P04436 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
P04436 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.87□□□□□ -0.19
P04436 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
P04436 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P04436 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms