Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
OPN1SWP03999 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
OPN1SWP03999 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
OPN1SWP03999 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
OPN1SWP03999 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
OPN1SWP03999 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
OPN1SWP03999 AC027601.5-201ENST00000624065 2482 ntBASIC14.27□□□□□ -0.12
OPN1SWP03999 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
OPN1SWP03999 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
OPN1SWP03999 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.27□□□□□ -0.12
OPN1SWP03999 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 GRK6P1-201ENST00000400595 1711 ntBASIC14.27□□□□□ -0.12
OPN1SWP03999 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
OPN1SWP03999 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.27□□□□□ -0.12
OPN1SWP03999 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 AC007787.1-201ENST00000588095 1583 ntBASIC14.27□□□□□ -0.12
OPN1SWP03999 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
OPN1SWP03999 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.27□□□□□ -0.12
OPN1SWP03999 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.27□□□□□ -0.12
OPN1SWP03999 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
OPN1SWP03999 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.27□□□□□ -0.12
OPN1SWP03999 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
OPN1SWP03999 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
OPN1SWP03999 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.27□□□□□ -0.13
OPN1SWP03999 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.27□□□□□ -0.13
OPN1SWP03999 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.27□□□□□ -0.13
OPN1SWP03999 CNN2P11-201ENST00000429351 262 ntBASIC14.27□□□□□ -0.13
OPN1SWP03999 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.27□□□□□ -0.13
OPN1SWP03999 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.27□□□□□ -0.13
OPN1SWP03999 AC069262.1-201ENST00000539058 672 ntBASIC14.27□□□□□ -0.13
OPN1SWP03999 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.27□□□□□ -0.13
OPN1SWP03999 AC010336.2-201ENST00000564226 506 ntBASIC14.27□□□□□ -0.13
OPN1SWP03999 AC051619.7-201ENST00000568314 623 ntBASIC14.27□□□□□ -0.13
OPN1SWP03999 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 AL138828.2-201ENST00000615812 383 ntBASIC14.27□□□□□ -0.13
OPN1SWP03999 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.27□□□□□ -0.13
OPN1SWP03999 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.27□□□□□ -0.13
OPN1SWP03999 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.27□□□□□ -0.13
OPN1SWP03999 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
OPN1SWP03999 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
OPN1SWP03999 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
OPN1SWP03999 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
OPN1SWP03999 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
OPN1SWP03999 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.27□□□□□ -0.13
OPN1SWP03999 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.27□□□□□ -0.13
OPN1SWP03999 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
OPN1SWP03999 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
OPN1SWP03999 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
OPN1SWP03999 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
OPN1SWP03999 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
OPN1SWP03999 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.26□□□□□ -0.13
OPN1SWP03999 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.26□□□□□ -0.13
OPN1SWP03999 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.26□□□□□ -0.13
OPN1SWP03999 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
OPN1SWP03999 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.26□□□□□ -0.13
OPN1SWP03999 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.26□□□□□ -0.13
OPN1SWP03999 AC104457.1-201ENST00000401024 814 ntBASIC14.26□□□□□ -0.13
OPN1SWP03999 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.26□□□□□ -0.13
OPN1SWP03999 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.26□□□□□ -0.13
OPN1SWP03999 AC109322.1-201ENST00000524499 1264 ntBASIC14.26□□□□□ -0.13
OPN1SWP03999 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.26□□□□□ -0.13
OPN1SWP03999 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
OPN1SWP03999 AL512356.2-201ENST00000546955 174 ntBASIC14.26□□□□□ -0.13
OPN1SWP03999 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
OPN1SWP03999 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
OPN1SWP03999 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.26□□□□□ -0.13
OPN1SWP03999 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.26□□□□□ -0.13
OPN1SWP03999 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
OPN1SWP03999 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms