Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TIMM17BP1-201ENST00000545713 516 ntBASIC13.56□□□□□ -0.24
APOC1P02654 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.56□□□□□ -0.24
APOC1P02654 AC051619.7-201ENST00000568314 623 ntBASIC13.56□□□□□ -0.24
APOC1P02654 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.56□□□□□ -0.24
APOC1P02654 AL138828.2-201ENST00000615812 383 ntBASIC13.56□□□□□ -0.24
APOC1P02654 Z92544.3-201ENST00000624747 417 ntBASIC13.56□□□□□ -0.24
APOC1P02654 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
APOC1P02654 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.56□□□□□ -0.24
APOC1P02654 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
APOC1P02654 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
APOC1P02654 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.56□□□□□ -0.24
APOC1P02654 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.56□□□□□ -0.24
APOC1P02654 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
APOC1P02654 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.55□□□□□ -0.24
APOC1P02654 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
APOC1P02654 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.55□□□□□ -0.24
APOC1P02654 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.55□□□□□ -0.24
APOC1P02654 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.55□□□□□ -0.24
APOC1P02654 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.55□□□□□ -0.24
APOC1P02654 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
APOC1P02654 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
APOC1P02654 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
APOC1P02654 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
APOC1P02654 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
APOC1P02654 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.55□□□□□ -0.24
APOC1P02654 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.55□□□□□ -0.24
APOC1P02654 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.55□□□□□ -0.24
APOC1P02654 RPL13P2-201ENST00000440687 659 ntBASIC13.55□□□□□ -0.24
APOC1P02654 AC109322.1-201ENST00000524499 1264 ntBASIC13.55□□□□□ -0.24
APOC1P02654 AC027369.6-201ENST00000525520 931 ntBASIC13.55□□□□□ -0.24
APOC1P02654 ZNF890P-202ENST00000530367 1156 ntBASIC13.55□□□□□ -0.24
APOC1P02654 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.55□□□□□ -0.24
APOC1P02654 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.55□□□□□ -0.24
APOC1P02654 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.55□□□□□ -0.24
APOC1P02654 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.55□□□□□ -0.24
APOC1P02654 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.55□□□□□ -0.24
APOC1P02654 SPDYE12P-201ENST00000618416 771 ntBASIC13.55□□□□□ -0.24
APOC1P02654 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 AC087499.5-201ENST00000452760 1342 ntBASIC13.55□□□□□ -0.24
APOC1P02654 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC1P02654 AC012508.2-201ENST00000567613 1472 ntBASIC13.55□□□□□ -0.24
APOC1P02654 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms