Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TDH-203ENST00000531764 1110 ntBASIC15.98■□□□□ 0.15
APOEP02649 PTP4A1P2-201ENST00000546033 454 ntBASIC15.98■□□□□ 0.15
APOEP02649 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.98■□□□□ 0.15
APOEP02649 SAMD11P1-201ENST00000571429 661 ntBASIC15.98■□□□□ 0.15
APOEP02649 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.98■□□□□ 0.15
APOEP02649 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
APOEP02649 AC239800.4-201ENST00000603712 296 ntBASIC15.98■□□□□ 0.15
APOEP02649 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
APOEP02649 AC005252.2-201ENST00000624630 1141 ntBASIC15.98■□□□□ 0.15
APOEP02649 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
APOEP02649 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
APOEP02649 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
APOEP02649 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
APOEP02649 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.98■□□□□ 0.15
APOEP02649 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
APOEP02649 AGAP7P-201ENST00000582299 2062 ntBASIC15.98■□□□□ 0.15
APOEP02649 AGAP14-201ENST00000624701 2060 ntBASIC15.98■□□□□ 0.15
APOEP02649 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
APOEP02649 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.97■□□□□ 0.15
APOEP02649 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.97■□□□□ 0.15
APOEP02649 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
APOEP02649 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.97■□□□□ 0.15
APOEP02649 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
APOEP02649 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 ACTG1P3-201ENST00000431775 1114 ntBASIC15.97■□□□□ 0.15
APOEP02649 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
APOEP02649 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
APOEP02649 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 MIR5189-201ENST00000577370 114 ntBASIC15.97■□□□□ 0.15
APOEP02649 CLUHP6-201ENST00000580789 941 ntBASIC15.97■□□□□ 0.15
APOEP02649 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.97■□□□□ 0.15
APOEP02649 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.97■□□□□ 0.15
APOEP02649 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.97■□□□□ 0.15
APOEP02649 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
APOEP02649 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.97■□□□□ 0.15
APOEP02649 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.97■□□□□ 0.15
APOEP02649 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOEP02649 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
APOEP02649 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
APOEP02649 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.96■□□□□ 0.15
APOEP02649 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
APOEP02649 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
APOEP02649 NUS1P3-201ENST00000423502 862 ntBASIC15.96■□□□□ 0.15
APOEP02649 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.96■□□□□ 0.15
APOEP02649 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.96■□□□□ 0.15
APOEP02649 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOEP02649 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms