Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IFNB1P01574 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.82■□□□□ 0.12
IFNB1P01574 AC107890.1-201ENST00000422478 521 ntBASIC15.82■□□□□ 0.12
IFNB1P01574 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.82■□□□□ 0.12
IFNB1P01574 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.82■□□□□ 0.12
IFNB1P01574 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.82■□□□□ 0.12
IFNB1P01574 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.82■□□□□ 0.12
IFNB1P01574 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
IFNB1P01574 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IFNB1P01574 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IFNB1P01574 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.82■□□□□ 0.12
IFNB1P01574 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFNB1P01574 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
IFNB1P01574 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.81■□□□□ 0.12
IFNB1P01574 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.81■□□□□ 0.12
IFNB1P01574 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.81■□□□□ 0.12
IFNB1P01574 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.81■□□□□ 0.12
IFNB1P01574 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
IFNB1P01574 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.81■□□□□ 0.12
IFNB1P01574 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
IFNB1P01574 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
IFNB1P01574 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
IFNB1P01574 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IFNB1P01574 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.81■□□□□ 0.12
IFNB1P01574 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.81■□□□□ 0.12
IFNB1P01574 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNB1P01574 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.8■□□□□ 0.12
IFNB1P01574 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNB1P01574 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
IFNB1P01574 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNB1P01574 LINC01230-201ENST00000625222 3017 ntBASIC15.8■□□□□ 0.12
IFNB1P01574 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IFNB1P01574 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms