Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TNFP01375 C18orf15-201ENST00000623680 2534 ntBASIC14.79□□□□□ -0.04
TNFP01375 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
TNFP01375 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 AC004945.1-201ENST00000416738 983 ntBASIC14.78□□□□□ -0.04
TNFP01375 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 POM121L10P-201ENST00000436994 1285 ntBASIC14.78□□□□□ -0.04
TNFP01375 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 CHMP1AP1-201ENST00000445563 662 ntBASIC14.78□□□□□ -0.04
TNFP01375 HSPB1P2-201ENST00000448722 546 ntBASIC14.78□□□□□ -0.04
TNFP01375 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.78□□□□□ -0.04
TNFP01375 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFP01375 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.78□□□□□ -0.04
TNFP01375 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.78□□□□□ -0.04
TNFP01375 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 AC112693.3-201ENST00000624819 1983 ntBASIC14.78□□□□□ -0.04
TNFP01375 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TNFP01375 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFP01375 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFP01375 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFP01375 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
TNFP01375 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.77□□□□□ -0.04
TNFP01375 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFP01375 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TNFP01375 AC136621.1-201ENST00000624017 2304 ntBASIC14.77□□□□□ -0.04
TNFP01375 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
TNFP01375 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFP01375 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 LILRP1-201ENST00000444199 1370 ntBASIC14.77□□□□□ -0.04
TNFP01375 WASH3P-207ENST00000560956 1394 ntBASIC14.77□□□□□ -0.04
TNFP01375 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFP01375 AC023024.2-201ENST00000623561 1993 ntBASIC14.77□□□□□ -0.04
TNFP01375 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFP01375 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TNFP01375 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TNFP01375 HIST2H2BB-201ENST00000449108 381 ntBASIC14.77□□□□□ -0.05
TNFP01375 AC004898.1-201ENST00000451057 766 ntBASIC14.77□□□□□ -0.05
TNFP01375 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.77□□□□□ -0.05
TNFP01375 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFP01375 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFP01375 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFP01375 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 AP001002.3-201ENST00000623482 206 ntBASIC14.77□□□□□ -0.05
TNFP01375 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.77□□□□□ -0.05
TNFP01375 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFP01375 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TNFP01375 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TNFP01375 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 SSR4P1-203ENST00000599569 2260 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms