Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TNFRSF6BO95407 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TNFRSF6BO95407 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TNFRSF6BO95407 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AC023090.2-201ENST00000625182 2110 ntBASIC11.12□□□□□ -0.63
TNFRSF6BO95407 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 RNA5SP410-201ENST00000516285 106 ntBASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AF238378.1-201ENST00000526806 358 ntBASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AC066615.1-201ENST00000640911 628 ntBASIC11.12□□□□□ -0.63
TNFRSF6BO95407 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TNFRSF6BO95407 DGCR9-201ENST00000609630 2415 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AKR1C7P-201ENST00000305623 895 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 VN2R19P-201ENST00000442399 1052 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AC108751.1-201ENST00000490852 363 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 RNPS1P1-201ENST00000507437 918 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AC105233.2-201ENST00000523697 349 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AF228730.5-201ENST00000530288 346 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 LINC01711-201ENST00000598340 967 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AC007064.4-201ENST00000637740 555 ntBASIC11.11□□□□□ -0.63
TNFRSF6BO95407 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.11□□□□□ -0.63
TNFRSF6BO95407 COL6A4P2-202ENST00000504443 2753 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms