Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RNF40O75150 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 SLC7A15P-201ENST00000424028 1363 ntBASIC16.54■□□□□ 0.24
RNF40O75150 KRT8P12-202ENST00000472924 1397 ntBASIC16.54■□□□□ 0.24
RNF40O75150 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF40O75150 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RNF40O75150 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF40O75150 AC091917.2-201ENST00000505002 744 ntBASIC16.54■□□□□ 0.24
RNF40O75150 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 AC055876.2-201ENST00000531834 546 ntBASIC16.54■□□□□ 0.24
RNF40O75150 AC061975.2-201ENST00000581722 295 ntBASIC16.54■□□□□ 0.24
RNF40O75150 AC017083.2-201ENST00000608069 979 ntBASIC16.54■□□□□ 0.24
RNF40O75150 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.54■□□□□ 0.24
RNF40O75150 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RNF40O75150 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RNF40O75150 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF40O75150 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
RNF40O75150 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF40O75150 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF40O75150 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF40O75150 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RNF40O75150 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RNF40O75150 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF40O75150 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF40O75150 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF40O75150 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF40O75150 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF40O75150 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RNF40O75150 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF40O75150 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF40O75150 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF40O75150 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF40O75150 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF40O75150 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF40O75150 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF40O75150 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.53■□□□□ 0.24
RNF40O75150 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.53■□□□□ 0.24
RNF40O75150 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF40O75150 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RNF40O75150 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF40O75150 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF40O75150 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF40O75150 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF40O75150 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF40O75150 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF40O75150 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
RNF40O75150 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF40O75150 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF40O75150 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RNF40O75150 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF40O75150 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF40O75150 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms