Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 AC104640.1-201ENST00000562617 2109 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SORBS3O60504 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 AC087481.3-201ENST00000602886 1894 ntBASIC17.1■□□□□ 0.33
SORBS3O60504 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SORBS3O60504 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.1■□□□□ 0.33
SORBS3O60504 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.1■□□□□ 0.33
SORBS3O60504 BCYRN1-201ENST00000418539 200 ntBASIC17.1■□□□□ 0.33
SORBS3O60504 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.1■□□□□ 0.33
SORBS3O60504 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 COX5BP1-201ENST00000507622 393 ntBASIC17.1■□□□□ 0.33
SORBS3O60504 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 AP003171.2-201ENST00000528208 925 ntBASIC17.1■□□□□ 0.33
SORBS3O60504 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.1■□□□□ 0.33
SORBS3O60504 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.1■□□□□ 0.33
SORBS3O60504 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.1■□□□□ 0.33
SORBS3O60504 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 AL133338.1-201ENST00000565695 1517 ntBASIC17.1■□□□□ 0.33
SORBS3O60504 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.1■□□□□ 0.33
SORBS3O60504 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SORBS3O60504 AC092384.3-202ENST00000564646 2873 ntBASIC17.1■□□□□ 0.33
SORBS3O60504 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
SORBS3O60504 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SORBS3O60504 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SORBS3O60504 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.09■□□□□ 0.33
SORBS3O60504 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.09■□□□□ 0.33
SORBS3O60504 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.09■□□□□ 0.33
SORBS3O60504 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.09■□□□□ 0.33
SORBS3O60504 POM121L8P-201ENST00000417732 1281 ntBASIC17.09■□□□□ 0.33
SORBS3O60504 POM121L9P-203ENST00000441984 1285 ntBASIC17.09■□□□□ 0.33
SORBS3O60504 AC026434.2-201ENST00000506094 1078 ntBASIC17.09■□□□□ 0.33
SORBS3O60504 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.09■□□□□ 0.33
SORBS3O60504 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.09■□□□□ 0.33
SORBS3O60504 AC104982.3-201ENST00000581995 514 ntBASIC17.09■□□□□ 0.33
SORBS3O60504 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SORBS3O60504 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.09■□□□□ 0.33
SORBS3O60504 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 AL023775.1-201ENST00000454907 1746 ntBASIC17.09■□□□□ 0.33
SORBS3O60504 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SORBS3O60504 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.09■□□□□ 0.33
SORBS3O60504 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.09■□□□□ 0.33
SORBS3O60504 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SORBS3O60504 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SORBS3O60504 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.09■□□□□ 0.33
SORBS3O60504 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SORBS3O60504 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SORBS3O60504 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SORBS3O60504 REXO1L4P-201ENST00000605109 1937 ntBASIC17.08■□□□□ 0.33
SORBS3O60504 AL137783.1-201ENST00000623494 1896 ntBASIC17.08■□□□□ 0.33
SORBS3O60504 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SORBS3O60504 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.08■□□□□ 0.32
SORBS3O60504 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.08■□□□□ 0.32
SORBS3O60504 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SORBS3O60504 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SORBS3O60504 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SORBS3O60504 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SORBS3O60504 GPAA1P2-201ENST00000417923 928 ntBASIC17.08■□□□□ 0.32
SORBS3O60504 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SORBS3O60504 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SORBS3O60504 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.08■□□□□ 0.32
SORBS3O60504 AC245100.3-201ENST00000441281 285 ntBASIC17.08■□□□□ 0.32
SORBS3O60504 AL591846.1-201ENST00000451736 433 ntBASIC17.08■□□□□ 0.32
SORBS3O60504 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.08■□□□□ 0.32
SORBS3O60504 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms