Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ACTN4O43707 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ACTN4O43707 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 AL645937.2-201ENST00000396808 931 ntBASIC17.06■□□□□ 0.32
ACTN4O43707 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 BASP1P1-201ENST00000430708 665 ntBASIC17.06■□□□□ 0.32
ACTN4O43707 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.06■□□□□ 0.32
ACTN4O43707 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 AL512638.1-201ENST00000457493 794 ntBASIC17.06■□□□□ 0.32
ACTN4O43707 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.06■□□□□ 0.32
ACTN4O43707 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 RN7SL832P-201ENST00000607781 1756 ntBASIC17.06■□□□□ 0.32
ACTN4O43707 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.06■□□□□ 0.32
ACTN4O43707 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ACTN4O43707 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACTN4O43707 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 MIR600HG-201ENST00000449175 5984 ntBASIC17.05■□□□□ 0.32
ACTN4O43707 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.05■□□□□ 0.32
ACTN4O43707 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ACTN4O43707 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ACTN4O43707 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 UGT1A2P-201ENST00000454886 866 ntBASIC17.05■□□□□ 0.32
ACTN4O43707 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.05■□□□□ 0.32
ACTN4O43707 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.05■□□□□ 0.32
ACTN4O43707 PRSS30P-206ENST00000641773 873 ntBASIC17.05■□□□□ 0.32
ACTN4O43707 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.05■□□□□ 0.32
ACTN4O43707 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.05■□□□□ 0.32
ACTN4O43707 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ACTN4O43707 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.05■□□□□ 0.32
ACTN4O43707 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACTN4O43707 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ACTN4O43707 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.05■□□□□ 0.32
ACTN4O43707 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.04■□□□□ 0.32
ACTN4O43707 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACTN4O43707 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACTN4O43707 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACTN4O43707 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACTN4O43707 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.04■□□□□ 0.32
ACTN4O43707 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ACTN4O43707 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ACTN4O43707 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.04■□□□□ 0.32
ACTN4O43707 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACTN4O43707 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACTN4O43707 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACTN4O43707 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.04■□□□□ 0.32
ACTN4O43707 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.04■□□□□ 0.32
ACTN4O43707 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.04■□□□□ 0.32
ACTN4O43707 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.04■□□□□ 0.32
ACTN4O43707 RRP7BP-205ENST00000566851 833 ntBASIC17.04■□□□□ 0.32
ACTN4O43707 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.04■□□□□ 0.32
ACTN4O43707 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.04■□□□□ 0.32
ACTN4O43707 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms