Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA2O43364 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA2O43364 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.14■□□□□ 0.17
HOXA2O43364 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA2O43364 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HOXA2O43364 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HOXA2O43364 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HOXA2O43364 AL157791.1-201ENST00000553667 1699 ntBASIC16.14■□□□□ 0.17
HOXA2O43364 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HOXA2O43364 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA2O43364 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA2O43364 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HOXA2O43364 E2F3P2-201ENST00000447755 1422 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.13■□□□□ 0.17
HOXA2O43364 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HOXA2O43364 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
HOXA2O43364 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.13■□□□□ 0.17
HOXA2O43364 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.13■□□□□ 0.17
HOXA2O43364 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HOXA2O43364 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA2O43364 AC007274.2-201ENST00000421675 662 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA2O43364 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.13■□□□□ 0.17
HOXA2O43364 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.13■□□□□ 0.17
HOXA2O43364 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.13■□□□□ 0.17
HOXA2O43364 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.13■□□□□ 0.17
HOXA2O43364 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.13■□□□□ 0.17
HOXA2O43364 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA2O43364 ALG3P1-201ENST00000508806 1114 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA2O43364 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA2O43364 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA2O43364 MIR4783-201ENST00000580343 82 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 AC009884.2-201ENST00000603110 324 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 AL132994.2-201ENST00000603120 687 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.13■□□□□ 0.17
HOXA2O43364 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.13■□□□□ 0.17
HOXA2O43364 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.13■□□□□ 0.17
HOXA2O43364 AL353726.2-201ENST00000623259 884 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 AC006058.4-201ENST00000624016 1670 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 INE2-201ENST00000630399 1874 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.13■□□□□ 0.17
HOXA2O43364 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
HOXA2O43364 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HOXA2O43364 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.13■□□□□ 0.17
HOXA2O43364 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
HOXA2O43364 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
HOXA2O43364 LILRP1-201ENST00000444199 1370 ntBASIC16.13■□□□□ 0.17
HOXA2O43364 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA2O43364 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXA2O43364 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.12■□□□□ 0.17
HOXA2O43364 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXA2O43364 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HOXA2O43364 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
HOXA2O43364 AC009093.2-202ENST00000620513 2079 ntBASIC16.12■□□□□ 0.17
HOXA2O43364 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXA2O43364 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HOXA2O43364 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HOXA2O43364 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXA2O43364 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.12■□□□□ 0.17
HOXA2O43364 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.12■□□□□ 0.17
HOXA2O43364 RPL18P13-201ENST00000478088 569 ntBASIC16.12■□□□□ 0.17
HOXA2O43364 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.12■□□□□ 0.17
HOXA2O43364 NUP210P1-202ENST00000504322 710 ntBASIC16.12■□□□□ 0.17
HOXA2O43364 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.12■□□□□ 0.17
HOXA2O43364 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.12■□□□□ 0.17
HOXA2O43364 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.12■□□□□ 0.17
HOXA2O43364 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.12■□□□□ 0.17
HOXA2O43364 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.12■□□□□ 0.17
HOXA2O43364 FGFR3P5-201ENST00000564496 886 ntBASIC16.12■□□□□ 0.17
HOXA2O43364 ADAM3B-201ENST00000569937 840 ntBASIC16.12■□□□□ 0.17
HOXA2O43364 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HOXA2O43364 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.12■□□□□ 0.17
HOXA2O43364 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.12■□□□□ 0.17
HOXA2O43364 AP003400.6-201ENST00000624698 740 ntBASIC16.12■□□□□ 0.17
HOXA2O43364 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.12■□□□□ 0.17
HOXA2O43364 NAP1L6-202ENST00000641404 1222 ntBASIC16.12■□□□□ 0.17
HOXA2O43364 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms