Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AL592309.1-201ENST00000443127 649 ntBASIC14.56□□□□□ -0.08
CLOCKO15516 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.56□□□□□ -0.08
CLOCKO15516 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.56□□□□□ -0.08
CLOCKO15516 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
CLOCKO15516 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.56□□□□□ -0.08
CLOCKO15516 AC025678.2-201ENST00000562061 970 ntBASIC14.56□□□□□ -0.08
CLOCKO15516 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.56□□□□□ -0.08
CLOCKO15516 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 AC073389.1-201ENST00000595595 795 ntBASIC14.56□□□□□ -0.08
CLOCKO15516 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.56□□□□□ -0.08
CLOCKO15516 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.56□□□□□ -0.08
CLOCKO15516 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLOCKO15516 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CLOCKO15516 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.56□□□□□ -0.08
CLOCKO15516 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLOCKO15516 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CLOCKO15516 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.56□□□□□ -0.08
CLOCKO15516 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.55□□□□□ -0.08
CLOCKO15516 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLOCKO15516 AC092135.3-201ENST00000624151 1846 ntBASIC14.55□□□□□ -0.08
CLOCKO15516 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 TFAMP1-201ENST00000412727 736 ntBASIC14.55□□□□□ -0.08
CLOCKO15516 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 KRT8P48-201ENST00000515599 1220 ntBASIC14.55□□□□□ -0.08
CLOCKO15516 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.55□□□□□ -0.08
CLOCKO15516 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.55□□□□□ -0.08
CLOCKO15516 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.55□□□□□ -0.08
CLOCKO15516 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.55□□□□□ -0.08
CLOCKO15516 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.55□□□□□ -0.08
CLOCKO15516 AC011467.4-201ENST00000594891 528 ntBASIC14.55□□□□□ -0.08
CLOCKO15516 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.55□□□□□ -0.08
CLOCKO15516 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 LINC00628-201ENST00000628516 1289 ntBASIC14.55□□□□□ -0.08
CLOCKO15516 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.55□□□□□ -0.08
CLOCKO15516 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.55□□□□□ -0.08
CLOCKO15516 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.55□□□□□ -0.08
CLOCKO15516 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.55□□□□□ -0.08
CLOCKO15516 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
CLOCKO15516 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CLOCKO15516 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.55□□□□□ -0.08
CLOCKO15516 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.55□□□□□ -0.08
CLOCKO15516 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLOCKO15516 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 CICP17-201ENST00000418553 2377 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CLOCKO15516 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 KRT18P32-201ENST00000424695 1287 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms