Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN1O15353 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN1O15353 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXN1O15353 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FOXN1O15353 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN1O15353 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN1O15353 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN1O15353 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FOXN1O15353 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FOXN1O15353 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN1O15353 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXN1O15353 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FOXN1O15353 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXN1O15353 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXN1O15353 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXN1O15353 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
FOXN1O15353 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXN1O15353 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
FOXN1O15353 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXN1O15353 RPL18P13-201ENST00000478088 569 ntBASIC18.1■□□□□ 0.49
FOXN1O15353 IGHV3-37-201ENST00000518544 340 ntBASIC18.1■□□□□ 0.49
FOXN1O15353 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXN1O15353 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXN1O15353 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
FOXN1O15353 YRDCP1-201ENST00000621419 643 ntBASIC18.1■□□□□ 0.49
FOXN1O15353 AC092127.1-201ENST00000567093 3455 ntBASIC18.1■□□□□ 0.49
FOXN1O15353 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 AC023824.1-201ENST00000562945 2975 ntBASIC18.1■□□□□ 0.49
FOXN1O15353 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FOXN1O15353 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FOXN1O15353 AC009090.5-201ENST00000624886 2285 ntBASIC18.1■□□□□ 0.49
FOXN1O15353 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXN1O15353 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN1O15353 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
FOXN1O15353 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
FOXN1O15353 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 KRT8P35-201ENST00000483942 1338 ntBASIC18.09■□□□□ 0.49
FOXN1O15353 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
FOXN1O15353 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN1O15353 AC245100.5-201ENST00000452108 331 ntBASIC18.09■□□□□ 0.49
FOXN1O15353 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN1O15353 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.09■□□□□ 0.49
FOXN1O15353 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN1O15353 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 AC093813.1-201ENST00000605066 256 ntBASIC18.09■□□□□ 0.49
FOXN1O15353 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXN1O15353 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 AC022532.1-201ENST00000624563 1728 ntBASIC18.09■□□□□ 0.49
FOXN1O15353 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXN1O15353 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXN1O15353 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
FOXN1O15353 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.08■□□□□ 0.49
FOXN1O15353 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.08■□□□□ 0.49
FOXN1O15353 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
FOXN1O15353 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.08■□□□□ 0.49
FOXN1O15353 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.08■□□□□ 0.49
FOXN1O15353 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXN1O15353 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
FOXN1O15353 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXN1O15353 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXN1O15353 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.08■□□□□ 0.48
FOXN1O15353 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXN1O15353 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXN1O15353 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXN1O15353 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.08■□□□□ 0.48
FOXN1O15353 AC006335.1-201ENST00000445200 547 ntBASIC18.08■□□□□ 0.48
FOXN1O15353 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.08■□□□□ 0.48
FOXN1O15353 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXN1O15353 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.08■□□□□ 0.48
FOXN1O15353 RTN3P1-201ENST00000536295 711 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms