Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD2O14647 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD2O14647 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.42■□□□□ 0.86
CHD2O14647 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD2O14647 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD2O14647 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CHD2O14647 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD2O14647 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 MIR6746-201ENST00000620971 63 ntBASIC20.41■□□□□ 0.86
CHD2O14647 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD2O14647 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD2O14647 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 CISD2-202ENST00000503643 808 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 DRG2-220ENST00000583355 891 ntTSL 3 BASIC20.41■□□□□ 0.86
CHD2O14647 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD2O14647 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD2O14647 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHD2O14647 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 TEKT4P2-202ENST00000559466 1312 ntBASIC20.4■□□□□ 0.86
CHD2O14647 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.4■□□□□ 0.86
CHD2O14647 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CHD2O14647 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD2O14647 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CHD2O14647 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC20.4■□□□□ 0.86
CHD2O14647 AC018638.5-201ENST00000450885 754 ntBASIC20.4■□□□□ 0.86
CHD2O14647 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHD2O14647 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD2O14647 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CHD2O14647 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
CHD2O14647 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 PCDHA14-201ENST00000506751 2298 ntBASIC20.4■□□□□ 0.86
CHD2O14647 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD2O14647 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD2O14647 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD2O14647 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHD2O14647 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC20.39■□□□□ 0.86
CHD2O14647 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC20.39■□□□□ 0.86
CHD2O14647 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC20.39■□□□□ 0.86
CHD2O14647 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC20.39■□□□□ 0.86
CHD2O14647 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.39■□□□□ 0.86
CHD2O14647 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CHD2O14647 ABHD17AP9-201ENST00000561925 548 ntBASIC20.39■□□□□ 0.86
CHD2O14647 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC20.39■□□□□ 0.86
CHD2O14647 AC006483.2-201ENST00000609813 515 ntBASIC20.39■□□□□ 0.86
CHD2O14647 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD2O14647 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD2O14647 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC20.39■□□□□ 0.85
CHD2O14647 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CHD2O14647 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD2O14647 AL139384.1-201ENST00000612143 3047 ntBASIC20.39■□□□□ 0.85
CHD2O14647 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD2O14647 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.39■□□□□ 0.85
CHD2O14647 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD2O14647 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD2O14647 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CHD2O14647 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
CHD2O14647 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC20.39■□□□□ 0.85
CHD2O14647 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms