Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
AP3B1O00203 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.41■□□□□ 0.06
AP3B1O00203 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
AP3B1O00203 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3B1O00203 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3B1O00203 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3B1O00203 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 AL158070.2-201ENST00000623713 1621 ntBASIC15.4■□□□□ 0.06
AP3B1O00203 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3B1O00203 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.4■□□□□ 0.06
AP3B1O00203 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.4■□□□□ 0.06
AP3B1O00203 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.4■□□□□ 0.06
AP3B1O00203 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3B1O00203 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.4■□□□□ 0.06
AP3B1O00203 AC104794.3-201ENST00000566840 1248 ntBASIC15.4■□□□□ 0.06
AP3B1O00203 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
AP3B1O00203 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
AP3B1O00203 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3B1O00203 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.4■□□□□ 0.06
AP3B1O00203 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.4■□□□□ 0.06
AP3B1O00203 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.4■□□□□ 0.06
AP3B1O00203 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.4■□□□□ 0.06
AP3B1O00203 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3B1O00203 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP3B1O00203 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
AP3B1O00203 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.4■□□□□ 0.06
AP3B1O00203 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP3B1O00203 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3B1O00203 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3B1O00203 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.39■□□□□ 0.05
AP3B1O00203 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP3B1O00203 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.39■□□□□ 0.05
AP3B1O00203 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
AP3B1O00203 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.39■□□□□ 0.05
AP3B1O00203 AL589987.1-201ENST00000453380 819 ntBASIC15.39■□□□□ 0.05
AP3B1O00203 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 SPDYE18-201ENST00000510091 1050 ntBASIC15.39■□□□□ 0.05
AP3B1O00203 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.39■□□□□ 0.05
AP3B1O00203 AC055876.2-201ENST00000531834 546 ntBASIC15.39■□□□□ 0.05
AP3B1O00203 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.39■□□□□ 0.05
AP3B1O00203 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 BRI3BPP1-201ENST00000594224 787 ntBASIC15.39■□□□□ 0.05
AP3B1O00203 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.39■□□□□ 0.05
AP3B1O00203 BX539320.1-201ENST00000623759 877 ntBASIC15.39■□□□□ 0.05
AP3B1O00203 PRSS30P-206ENST00000641773 873 ntBASIC15.39■□□□□ 0.05
AP3B1O00203 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP3B1O00203 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3B1O00203 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.39■□□□□ 0.05
AP3B1O00203 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms