Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX39AO00148 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DDX39AO00148 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 AC006001.1-201ENST00000325130 474 ntBASIC17.09■□□□□ 0.33
DDX39AO00148 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.09■□□□□ 0.33
DDX39AO00148 FAM21FP-201ENST00000426241 1131 ntBASIC17.09■□□□□ 0.33
DDX39AO00148 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.09■□□□□ 0.33
DDX39AO00148 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.09■□□□□ 0.33
DDX39AO00148 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.09■□□□□ 0.33
DDX39AO00148 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 AL583810.1-201ENST00000553344 1045 ntBASIC17.09■□□□□ 0.33
DDX39AO00148 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
DDX39AO00148 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
DDX39AO00148 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX39AO00148 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DDX39AO00148 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.09■□□□□ 0.33
DDX39AO00148 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.09■□□□□ 0.33
DDX39AO00148 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
DDX39AO00148 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DDX39AO00148 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.08■□□□□ 0.33
DDX39AO00148 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
DDX39AO00148 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DDX39AO00148 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DDX39AO00148 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DDX39AO00148 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DDX39AO00148 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
DDX39AO00148 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
DDX39AO00148 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DDX39AO00148 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.08■□□□□ 0.33
DDX39AO00148 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.08■□□□□ 0.32
DDX39AO00148 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.08■□□□□ 0.32
DDX39AO00148 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
DDX39AO00148 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.08■□□□□ 0.32
DDX39AO00148 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
DDX39AO00148 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
DDX39AO00148 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 YBX1P6-201ENST00000442962 1002 ntBASIC17.08■□□□□ 0.32
DDX39AO00148 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.08■□□□□ 0.32
DDX39AO00148 AC026434.2-201ENST00000506094 1078 ntBASIC17.08■□□□□ 0.32
DDX39AO00148 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.08■□□□□ 0.32
DDX39AO00148 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
DDX39AO00148 AC079316.1-201ENST00000548397 411 ntBASIC17.08■□□□□ 0.32
DDX39AO00148 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.08■□□□□ 0.32
DDX39AO00148 RN7SL48P-201ENST00000579283 293 ntBASIC17.08■□□□□ 0.32
DDX39AO00148 AC010328.2-201ENST00000597698 1111 ntBASIC17.08■□□□□ 0.32
DDX39AO00148 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
DDX39AO00148 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.08■□□□□ 0.32
DDX39AO00148 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
DDX39AO00148 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.08■□□□□ 0.32
DDX39AO00148 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.08■□□□□ 0.32
DDX39AO00148 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
DDX39AO00148 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
DDX39AO00148 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DDX39AO00148 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
DDX39AO00148 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DDX39AO00148 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DDX39AO00148 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms