Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00473A8K010 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 GRK6P1-201ENST00000400595 1711 ntBASIC12.4□□□□□ -0.42
LINC00473A8K010 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
LINC00473A8K010 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00473A8K010 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00473A8K010 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.4□□□□□ -0.42
LINC00473A8K010 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 DUX4L27-201ENST00000554796 1261 ntBASIC12.4□□□□□ -0.42
LINC00473A8K010 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
LINC00473A8K010 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LINC00473A8K010 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00473A8K010 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00473A8K010 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00473A8K010 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00473A8K010 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00473A8K010 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00473A8K010 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00473A8K010 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00473A8K010 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.4□□□□□ -0.43
LINC00473A8K010 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00473A8K010 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.4□□□□□ -0.43
LINC00473A8K010 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00473A8K010 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00473A8K010 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 AC027601.5-201ENST00000624065 2482 ntBASIC12.39□□□□□ -0.43
LINC00473A8K010 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LINC00473A8K010 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LINC00473A8K010 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00473A8K010 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC00473A8K010 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00473A8K010 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00473A8K010 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00473A8K010 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC00473A8K010 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00473A8K010 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.39□□□□□ -0.43
LINC00473A8K010 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC00473A8K010 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC00473A8K010 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.39□□□□□ -0.43
LINC00473A8K010 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00473A8K010 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
LINC00473A8K010 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms