Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 AC009078.2-202ENST00000463353 338 ntBASIC13.27□□□□□ -0.29
SHISA3A0PJX4 AC069335.1-201ENST00000489972 472 ntBASIC13.27□□□□□ -0.29
SHISA3A0PJX4 FAM86C2P-203ENST00000528684 1004 ntBASIC13.27□□□□□ -0.29
SHISA3A0PJX4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 KRT8P23-201ENST00000560090 1207 ntBASIC13.27□□□□□ -0.29
SHISA3A0PJX4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 AL133215.2-201ENST00000609242 977 ntBASIC13.27□□□□□ -0.29
SHISA3A0PJX4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SHISA3A0PJX4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 SPDYE11-202ENST00000450699 704 ntBASIC13.26□□□□□ -0.29
SHISA3A0PJX4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 AC106730.1-201ENST00000566722 1090 ntBASIC13.26□□□□□ -0.29
SHISA3A0PJX4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 SPDYE9P-201ENST00000570642 692 ntBASIC13.26□□□□□ -0.29
SHISA3A0PJX4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 AL360270.3-201ENST00000609118 1348 ntBASIC13.26□□□□□ -0.29
SHISA3A0PJX4 AC026120.1-201ENST00000611536 926 ntBASIC13.26□□□□□ -0.29
SHISA3A0PJX4 SPDYE10P-202ENST00000612005 668 ntBASIC13.26□□□□□ -0.29
SHISA3A0PJX4 SPDYE8P-202ENST00000612377 668 ntBASIC13.26□□□□□ -0.29
SHISA3A0PJX4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SHISA3A0PJX4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SHISA3A0PJX4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms