Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 MTHFR-210ENST00000641407 2387 ntBASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRBV5-4A0A0C4DH59 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 CD8B2-202ENST00000417670 633 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 C2orf27AP3-201ENST00000434123 579 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 AC016694.1-201ENST00000434179 700 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 RNA5SP486-201ENST00000515961 83 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 KRT90P-201ENST00000549264 1064 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 AC244669.2-201ENST00000612320 853 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 AL354718.3-201ENST00000616414 581 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 CR382287.1-201ENST00000623954 586 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 TSPY26P-202ENST00000565928 3884 ntBASIC14.88□□□□□ -0.03
TRBV5-4A0A0C4DH59 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 AC106881.1-201ENST00000605849 3329 ntBASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 ARSEP1-201ENST00000420443 635 ntBASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 KRT43P-201ENST00000434019 910 ntBASIC14.87□□□□□ -0.03
TRBV5-4A0A0C4DH59 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms