Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 SPDYE18-201ENST00000510091 1050 ntBASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 REXO1L4P-201ENST00000605109 1937 ntBASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 AL589987.1-201ENST00000453380 819 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 AC004066.1-201ENST00000502488 802 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 DOC2GP-202ENST00000514950 1163 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 AC104794.3-201ENST00000566840 1248 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 SAMD11P1-201ENST00000571429 661 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 AC005498.2-205ENST00000593218 784 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 CLK3P2-201ENST00000427566 1453 ntBASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGA11Q9Y5H2 OR2I1P-210ENST00000642037 4691 ntBASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AC079781.5-202ENST00000641784 3743 ntBASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms