Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NINLQ9Y2I6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NINLQ9Y2I6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NINLQ9Y2I6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NINLQ9Y2I6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NINLQ9Y2I6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NINLQ9Y2I6 MIR33B-201ENST00000385104 96 ntBASIC20.59■□□□□ 0.89
NINLQ9Y2I6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NINLQ9Y2I6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.59■□□□□ 0.89
NINLQ9Y2I6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NINLQ9Y2I6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 FAM58BP-201ENST00000439056 645 ntBASIC20.58■□□□□ 0.88
NINLQ9Y2I6 AKR7A2P1-201ENST00000460134 915 ntBASIC20.58■□□□□ 0.88
NINLQ9Y2I6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 BX088702.1-201ENST00000610784 235 ntBASIC20.58■□□□□ 0.88
NINLQ9Y2I6 AC138649.2-201ENST00000615886 705 ntBASIC20.58■□□□□ 0.88
NINLQ9Y2I6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.58■□□□□ 0.88
NINLQ9Y2I6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 PPT1-215ENST00000641471 2368 ntBASIC20.57■□□□□ 0.88
NINLQ9Y2I6 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 TUBB8P8-201ENST00000458717 1058 ntBASIC20.57■□□□□ 0.88
NINLQ9Y2I6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.57■□□□□ 0.88
NINLQ9Y2I6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 AC005324.6-201ENST00000587972 613 ntBASIC20.57■□□□□ 0.88
NINLQ9Y2I6 BNIP3P13-201ENST00000599968 566 ntBASIC20.57■□□□□ 0.88
NINLQ9Y2I6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NINLQ9Y2I6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms