Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 AC073869.4-201ENST00000620841 800 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 KRT8P28-201ENST00000433288 1390 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 AL590440.2-201ENST00000641973 1595 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 AC124067.4-201ENST00000519691 2379 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 RPL5P21-201ENST00000404620 815 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 TPT1P9-201ENST00000413759 514 ntBASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 OR52V1P-201ENST00000515557 898 ntBASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 AC141586.5-201ENST00000624546 2050 ntBASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC23.1■■□□□ 1.29
RIMBP3Q9UFD9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 AL627095.1-201ENST00000414775 321 ntBASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 RN7SL375P-201ENST00000492442 298 ntBASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 KLF17P1-201ENST00000547105 1126 ntBASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 AP005264.5-201ENST00000590066 467 ntBASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 RPL13AP3-202ENST00000494676 1473 ntBASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RIMBP3Q9UFD9 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 GRPEL2P1-201ENST00000453145 339 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms