Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 RN7SKP230-201ENST00000365642 335 ntBASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 VDAC1P1-201ENST00000439229 848 ntBASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 AC090857.1-201ENST00000527400 390 ntBASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 IQSEC3P1-201ENST00000538799 536 ntBASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 AC008805.1-201ENST00000590892 364 ntBASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 AL132994.2-201ENST00000603120 687 ntBASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 FGFR3P1-201ENST00000449999 601 ntBASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 AC073150.1-201ENST00000450406 1084 ntBASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 HLA-J-204ENST00000495278 958 ntBASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 AP003419.4-201ENST00000616071 517 ntBASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 NAP1L6-202ENST00000641404 1222 ntBASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 MBLAC2-202ENST00000514906 1936 ntBASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 AC105250.1-201ENST00000509378 2057 ntBASIC16.54■□□□□ 0.24
TRMT13Q9NUP7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 AC244394.1-201ENST00000435000 1665 ntBASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 AL353637.1-201ENST00000451571 732 ntBASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 AC009779.1-201ENST00000551138 283 ntBASIC16.53■□□□□ 0.24
TRMT13Q9NUP7 AC242376.1-201ENST00000559033 726 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms