Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 AC004835.2-201ENST00000603762 682 ntBASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 MIR6080-201ENST00000617359 66 ntBASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CDC42SE2Q9NRR3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CDC42SE2Q9NRR3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CDC42SE2Q9NRR3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
CDC42SE2Q9NRR3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
CDC42SE2Q9NRR3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CDC42SE2Q9NRR3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
CDC42SE2Q9NRR3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
CDC42SE2Q9NRR3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
CDC42SE2Q9NRR3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AC015802.1-201ENST00000588104 1449 ntBASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AL080243.2-201ENST00000418783 582 ntBASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 DNAJB3-201ENST00000446806 729 ntBASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 YBX1P5-201ENST00000509441 847 ntBASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 SAMD11P1-201ENST00000571429 661 ntBASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AC009093.7-201ENST00000623853 1223 ntBASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AC041040.2-201ENST00000622926 2899 ntBASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CDC42SE2Q9NRR3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 AC005840.4-201ENST00000541242 2494 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms