Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 TPM3P8-201ENST00000330554 643 ntBASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 AL136309.1-201ENST00000403917 691 ntBASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 AC245100.3-201ENST00000441281 285 ntBASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 Z93015.1-201ENST00000451718 390 ntBASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 FTLP10-202ENST00000505798 471 ntBASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 AL358472.3-201ENST00000608147 415 ntBASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 ZACNP1-201ENST00000612259 710 ntBASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 AL590440.2-201ENST00000641973 1595 ntBASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.43□□□□□ -0.26
KIAA1549Q9HCM3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 COX5BP1-201ENST00000507622 393 ntBASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 KRT8P4-201ENST00000509735 1454 ntBASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 KHSRPP1-201ENST00000427983 1768 ntBASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 AL136379.1-201ENST00000623471 2642 ntBASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 AC013726.1-201ENST00000563747 2285 ntBASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KIAA1549Q9HCM3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 AL133338.1-201ENST00000565695 1517 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms