Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 RPL5P21-201ENST00000404620 815 ntBASIC16.51■□□□□ 0.23
HIPK3Q9H422 AC010141.1-201ENST00000411585 623 ntBASIC16.51■□□□□ 0.23
HIPK3Q9H422 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 AC073150.1-201ENST00000450406 1084 ntBASIC16.51■□□□□ 0.23
HIPK3Q9H422 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 RN7SL818P-201ENST00000485099 259 ntBASIC16.51■□□□□ 0.23
HIPK3Q9H422 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 AC009779.1-201ENST00000551138 283 ntBASIC16.51■□□□□ 0.23
HIPK3Q9H422 NPM1P43-201ENST00000558669 786 ntBASIC16.51■□□□□ 0.23
HIPK3Q9H422 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 MIR4754-201ENST00000582477 89 ntBASIC16.51■□□□□ 0.23
HIPK3Q9H422 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 RN7SL725P-201ENST00000606439 259 ntBASIC16.51■□□□□ 0.23
HIPK3Q9H422 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK3Q9H422 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HIPK3Q9H422 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 AC009093.2-202ENST00000620513 2079 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 INE2-201ENST00000630399 1874 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 AL157414.3-201ENST00000624276 1954 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 AC114501.1-201ENST00000445949 172 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 PGAM1P5-201ENST00000548011 764 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 AC008805.1-201ENST00000590892 364 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 HLA-C-210ENST00000640219 976 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 AL805961.1-201ENST00000642026 753 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 TBC1D3J-201ENST00000620719 1426 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.5■□□□□ 0.23
HIPK3Q9H422 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 AC092850.2-201ENST00000623821 2697 ntBASIC16.5■□□□□ 0.23
HIPK3Q9H422 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIPK3Q9H422 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms