Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 IL9RP2-201ENST00000423948 1312 ntBASIC14.87□□□□□ -0.03
EBF4Q9BQW3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 KRT8P12-202ENST00000472924 1397 ntBASIC14.86□□□□□ -0.03
EBF4Q9BQW3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 SBF1P1-201ENST00000444527 5631 ntBASIC14.86□□□□□ -0.03
EBF4Q9BQW3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 AC018529.1-201ENST00000613063 361 ntBASIC14.86□□□□□ -0.03
EBF4Q9BQW3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
EBF4Q9BQW3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.85□□□□□ -0.03
EBF4Q9BQW3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 MED15P5-201ENST00000423150 992 ntBASIC14.85□□□□□ -0.03
EBF4Q9BQW3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AC022447.6-201ENST00000515522 438 ntBASIC14.85□□□□□ -0.03
EBF4Q9BQW3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 ALG1L8P-201ENST00000533887 760 ntBASIC14.85□□□□□ -0.03
EBF4Q9BQW3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AC055717.3-201ENST00000622967 595 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms